Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_I02
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr...    31   0.77 
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr...    31   0.77 
Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U41007-11|AAA82273.1|   92|Caenorhabditis elegans Hypothetical p...    28   5.4  

>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
           protein C01B9.1b protein.
          Length = 1671

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 299 VFSDALLYIVILRTDWDDDYISKKHSASVTTEN 397
           + SD  + +++L+TDWD+D   KK    V ++N
Sbjct: 145 ILSDLDVKVLVLKTDWDEDDEDKKPIQKVESDN 177


>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
           protein C01B9.1a protein.
          Length = 1601

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 299 VFSDALLYIVILRTDWDDDYISKKHSASVTTEN 397
           + SD  + +++L+TDWD+D   KK    V ++N
Sbjct: 75  ILSDLDVKVLVLKTDWDEDDEDKKPIQKVESDN 107


>Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical
           protein F15A4.4 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 598 LYMIWYIISFAQDFHWVPPLVRVASPRLFNPGLY 497
           L +I++ I F + F ++PPL  + SP  F P L+
Sbjct: 68  LVLIFWGIFFNRLFMFIPPLCPLVSPLFFEPSLF 101


>U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical
           protein F53B1.2 protein.
          Length = 483

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = +3

Query: 129 VHGK*YDPGNAPSIRNSKY*CVCE------LAMSTSGASTTVRRATLTRDDTT 269
           VH +    GN PS++NSK   + E      L++S     TT RRA +  D+ T
Sbjct: 89  VHHRSTPNGNGPSLKNSKDGLLVEYNEQNHLSISGEDVYTTTRRAEIVEDEET 141


>U41007-11|AAA82273.1|   92|Caenorhabditis elegans Hypothetical
           protein C33H5.13 protein.
          Length = 92

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -1

Query: 578 YIIRPGLPLGSATCACGVTEIVQPGTVQSCDCPGYRVWR*RQRAAG 441
           Y ++PG+P+G            QP TV   DC  +   R R+   G
Sbjct: 26  YTVQPGVPIGQGVQPAYAVYYQQPQTVIVDDCHHHHHHREREHGGG 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,145,261
Number of Sequences: 27780
Number of extensions: 343507
Number of successful extensions: 758
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)