Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_H24
         (659 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0660 + 10244962-10245606                                         30   1.4  
02_01_0391 + 2838471-2838794,2838892-2839028,2841155-2841631,284...    30   1.4  
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552...    30   1.4  
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74...    29   3.3  
08_01_0841 + 8223768-8223871,8227749-8228745,8228779-8228828,822...    28   5.7  
05_03_0066 + 7980038-7981468                                           28   7.6  

>03_02_0660 + 10244962-10245606
          Length = 214

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -1

Query: 461 VRKIKEQYNYEIEKNPPE-WEYVKRLLPFTTI--PKIIPKDSYPSGWVPPKEE 312
           V+ +KE+Y  E+ K PP  W +  RL  F     P   P  + P   V  +EE
Sbjct: 78  VQTLKERYKRELAKPPPSGWRHFSRLQEFLLAGPPPGFPPKTMPPASVKKEEE 130


>02_01_0391 +
           2838471-2838794,2838892-2839028,2841155-2841631,
           2841719-2841999,2843009-2843051,2844094-2844148,
           2845771-2845824,2846282-2846314,2846574-2846621,
           2846885-2846950,2847286-2847426
          Length = 552

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 232 MRKISIIRKIEGDIWLLNDEIKQYLKQKNKRY 137
           MRK+ I+ + +  IW+ ND +++ ++  NK Y
Sbjct: 178 MRKVKIMGREDKIIWIPNDNLRRLVRSLNKTY 209


>01_05_0801 +
           25353708-25353914,25354307-25354429,25355035-25355205,
           25355303-25355392,25355497-25355583,25355664-25355719,
           25355812-25355905,25356032-25356144,25356211-25356283,
           25356603-25356683,25356865-25356951,25357031-25357135,
           25357279-25357385,25357481-25357541,25357931-25358158,
           25359720-25360677,25360816-25360997,25361237-25361326,
           25361422-25361709,25361844-25362056,25362560-25362784
          Length = 1212

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -1

Query: 542 DLGAKLLPESQLALSSKH--YSSYGKSPFVRKIKEQYNYEIEKNPPEWEYVKRLLPFTTI 369
           D G+++LP + L  + K   ++ Y +     K     N  + + PP++E+     PF T 
Sbjct: 322 DFGSEILPRAVLEHNVKACVFTEYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTS 381

Query: 368 PKIIP 354
           P+ +P
Sbjct: 382 PRYLP 386


>03_01_0093 -
           745434-746057,746492-747112,747222-747791,747870-747948,
           748258-748331,748385-748387
          Length = 656

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = -2

Query: 331 GSPQKKRR*TI--HTFYQEQKMLSYLSIXXXXXRGMRKI--SIIRKIEGDIWLLNDEIKQ 164
           G+P K++  T   +TF+  ++++          + M+ +   I++ + GD WL   + KQ
Sbjct: 81  GTPAKRQAVTNPQNTFFGTKRLIGRRFDDPQTQKEMKMVPYKIVKALNGDAWLETTDGKQ 140

Query: 163 YLKQKNKRYVETRVHEVA 110
           Y   +   +V T++ E A
Sbjct: 141 YSPSQIGAFVLTKMKETA 158


>08_01_0841 +
           8223768-8223871,8227749-8228745,8228779-8228828,
           8228896-8230396
          Length = 883

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 547 HLIWVQNYCRNHNWHYLQNITLVTENHRL 461
           H+ WVQ   +  ++   +N+ LVTEN ++
Sbjct: 319 HVYWVQLLSKQESFERFKNLILVTENSKM 347


>05_03_0066 + 7980038-7981468
          Length = 476

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -1

Query: 518 ESQLALSSKHYSSYGKSPFV--RKIKEQYNYEIEKNPPEWEYVKRL 387
           E QLAL+  HY + GK+  V  RK+KE+   ++E N    E  K L
Sbjct: 373 EGQLALTLLHYGNAGKAKKVLDRKLKEK---KVESNSTVTEKSKEL 415


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,081,618
Number of Sequences: 37544
Number of extensions: 309219
Number of successful extensions: 741
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)