BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_H23
(785 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long fo... 25 3.5
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 24 6.1
>AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long form
protein.
Length = 311
Score = 24.6 bits (51), Expect = 3.5
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -3
Query: 636 NDSIIYCFIKCYIIG 592
ND++ +C++KC + G
Sbjct: 63 NDAVTHCYVKCTLAG 77
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 23.8 bits (49), Expect = 6.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 322 ELRISTFSYTAGVSLT*LCSVFLTSVHIMLLNVK 221
ELR+ T + + L LCS+ + H+ +++ K
Sbjct: 122 ELRLRTKAQVIAILLPILCSLSVAITHVTMVDFK 155
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,540
Number of Sequences: 2352
Number of extensions: 14920
Number of successful extensions: 60
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -