Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_H18
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93785-7|CAB07863.1|  107|Caenorhabditis elegans Hypothetical pr...    50   1e-06
Z93785-6|CAB07862.1|  104|Caenorhabditis elegans Hypothetical pr...    50   1e-06
Z92803-12|CAB07248.1|  107|Caenorhabditis elegans Hypothetical p...    50   1e-06
Z92803-11|CAB07247.1|  104|Caenorhabditis elegans Hypothetical p...    50   1e-06
Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z81540-4|CAB04401.1|  161|Caenorhabditis elegans Hypothetical pr...    28   6.8  

>Z93785-7|CAB07863.1|  107|Caenorhabditis elegans Hypothetical
           protein K01G5.8b protein.
          Length = 107

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 653 QRILXKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 540
           +R+L +A ++H+++VEK N+ L  +TE  DIPKVSWTK
Sbjct: 70  ERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 107


>Z93785-6|CAB07862.1|  104|Caenorhabditis elegans Hypothetical
           protein K01G5.8a protein.
          Length = 104

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 653 QRILXKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 540
           +R+L +A ++H+++VEK N+ L  +TE  DIPKVSWTK
Sbjct: 67  ERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 104


>Z92803-12|CAB07248.1|  107|Caenorhabditis elegans Hypothetical
           protein K01G5.8b protein.
          Length = 107

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 653 QRILXKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 540
           +R+L +A ++H+++VEK N+ L  +TE  DIPKVSWTK
Sbjct: 70  ERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 107


>Z92803-11|CAB07247.1|  104|Caenorhabditis elegans Hypothetical
           protein K01G5.8a protein.
          Length = 104

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 653 QRILXKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 540
           +R+L +A ++H+++VEK N+ L  +TE  DIPKVSWTK
Sbjct: 67  ERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 104


>Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical
           protein T28F3.4a protein.
          Length = 573

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/65 (23%), Positives = 33/65 (50%)
 Frame = -1

Query: 472 ISNQIAAKFLYFIIFFGN*DNHYISYMYFFLY**CMPICWKWHSSTKLTRMPPFTVSLEN 293
           I+N   A FL  I +F +  N  + +++F +   CM        ++ L+  P +T ++ +
Sbjct: 385 IANFGGALFLILITYFVDCTNPTLGFVFFCMMYGCMGTLVSGFYTSLLSLAPKYTATMSS 444

Query: 292 *TLYC 278
            +++C
Sbjct: 445 ISVFC 449


>Z81540-4|CAB04401.1|  161|Caenorhabditis elegans Hypothetical
           protein F46B3.4 protein.
          Length = 161

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 88  WLVSPCRP--HIFSSILYVLSFVHGHHY 165
           W V+PCRP  HIF   ++ +  V G  Y
Sbjct: 118 WYVNPCRPDVHIFDIGVFEMDTVKGEDY 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,960,144
Number of Sequences: 27780
Number of extensions: 316303
Number of successful extensions: 737
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)