Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_H10
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY494975-1|AAR87492.1| 486|Caenorhabditis elegans collagen/olfa... 106 2e-23
AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin (col... 106 2e-23
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 103 1e-22
U00050-3|AAL02480.1| 556|Caenorhabditis elegans Hypothetical pr... 31 0.74
U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical pr... 31 0.74
U00050-1|AAA50697.1| 583|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 28 5.2
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 28 5.2
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 28 6.9
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p... 28 6.9
U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical pr... 27 9.1
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 27 9.1
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 27 9.1
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 27 9.1
>AY494975-1|AAR87492.1| 486|Caenorhabditis elegans
collagen/olfactomedin domain containingprotein 2
protein.
Length = 486
Score = 106 bits (254), Expect = 2e-23
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Frame = -2
Query: 665 LREYRNXASFKSDHVDEFHKXQKPXYGNGHIVYGGSFFYQANESGQPGEIIRYDLTQSRI 486
L E+RN A + DHV + H+ G H+++ S FYQ +G P I +Y+ +
Sbjct: 279 LIEFRNEAEMRRDHVGKVHRLPYIFDGTNHVIFNASLFYQ--RAGYP-IIAKYEFNSKQY 335
Query: 485 KSAHLPYA----DGRLYTSQHNQVDFSADDNGLWAIYSIESSNNTAVAKLSFDPNKDSLN 318
+P A D LY + N D + D+N LW ++ + +VAK+ + +L
Sbjct: 336 SQFEIPGAAYRGDQYLYNNSMNYFDLAIDENALWVMFHYQEEAFLSVAKVDIN----NLT 391
Query: 317 IDYVWNIS-LNHKQVGEMFIVCGVLYALDSATDRDSKVTVAIDLYRSKPVEVSLQFTNPF 141
I +N++ +NH V +VCG +Y ++SA+++ + ++ A D YR+ + +++ N +
Sbjct: 392 IYEAFNLTTVNHTDVANGIVVCGTIYLVESASEQSTYISTAYDFYRNTYSQPLIKWINLY 451
Query: 140 RKTTQLGYDHTHKELYSWDKGNQLTYP 60
+ + Y+ K +Y +D G L+ P
Sbjct: 452 KNANMISYNAYDKRIYIYDHGYMLSVP 478
>AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin
(collagen plus olfactomedin)family protein 2 protein.
Length = 486
Score = 106 bits (254), Expect = 2e-23
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Frame = -2
Query: 665 LREYRNXASFKSDHVDEFHKXQKPXYGNGHIVYGGSFFYQANESGQPGEIIRYDLTQSRI 486
L E+RN A + DHV + H+ G H+++ S FYQ +G P I +Y+ +
Sbjct: 279 LIEFRNEAEMRRDHVGKVHRLPYIFDGTNHVIFNASLFYQ--RAGYP-IIAKYEFNSKQY 335
Query: 485 KSAHLPYA----DGRLYTSQHNQVDFSADDNGLWAIYSIESSNNTAVAKLSFDPNKDSLN 318
+P A D LY + N D + D+N LW ++ + +VAK+ + +L
Sbjct: 336 SQFEIPGAAYRGDQYLYNNSMNYFDLAIDENALWVMFHYQEEAFLSVAKVDIN----NLT 391
Query: 317 IDYVWNIS-LNHKQVGEMFIVCGVLYALDSATDRDSKVTVAIDLYRSKPVEVSLQFTNPF 141
I +N++ +NH V +VCG +Y ++SA+++ + ++ A D YR+ + +++ N +
Sbjct: 392 IYEAFNLTTVNHTDVANGIVVCGTIYLVESASEQSTYISTAYDFYRNTYSQPLIKWINLY 451
Query: 140 RKTTQLGYDHTHKELYSWDKGNQLTYP 60
+ + Y+ K +Y +D G L+ P
Sbjct: 452 KNANMISYNAYDKRIYIYDHGYMLSVP 478
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 103 bits (247), Expect = 1e-22
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Frame = -2
Query: 587 GNGHIVYGGSFFYQANESGQPGEIIRYDLT------------QSRIKSAHLP-------Y 465
G G++VY GS++Y + + ++RY+L S I LP
Sbjct: 396 GTGNVVYNGSYYYHKHGTTS---LVRYELETGVQVEAELDPEMSHIDCGRLPDHTFEECN 452
Query: 464 ADGR---LYTSQHNQVDFSADDNGLWAIYSIESSNNTAVAKLSFDPNKDSLNIDYVWNIS 294
A R LY HN VDF+ D+NGLWAIY+ S +AK+ + SL + +WN+
Sbjct: 453 ATDRHVWLYDRPHNYVDFAVDENGLWAIYAGADSETMRMAKI-----EPSLFVVNIWNVE 507
Query: 293 LNHKQVGEMFIVCGVLYALDSATDRDSKVTVAIDLYRSKPVEVSLQFTNPFRKTTQLGYD 114
+N ++ + FI+CGV Y L SA + +++T A DL+R+ + +++ NP++ T L Y+
Sbjct: 508 VNTTEIADSFIMCGVWYGLKSANNLQTQITHAYDLFRNDTIPGQVEWYNPYQGLTMLHYN 567
Query: 113 HTHKELYSWDKGNQLTYPVRYNE 45
LY +D + L+ VR E
Sbjct: 568 PLDARLYFFDNSSLLSVNVRIEE 590
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 103 bits (247), Expect = 1e-22
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Frame = -2
Query: 587 GNGHIVYGGSFFYQANESGQPGEIIRYDLT------------QSRIKSAHLP-------Y 465
G G++VY GS++Y + + ++RY+L S I LP
Sbjct: 396 GTGNVVYNGSYYYHKHGTTS---LVRYELETGVQVEAELDPEMSHIDCGRLPDHTFEECN 452
Query: 464 ADGR---LYTSQHNQVDFSADDNGLWAIYSIESSNNTAVAKLSFDPNKDSLNIDYVWNIS 294
A R LY HN VDF+ D+NGLWAIY+ S +AK+ + SL + +WN+
Sbjct: 453 ATDRHVWLYDRPHNYVDFAVDENGLWAIYAGADSETMRMAKI-----EPSLFVVNIWNVE 507
Query: 293 LNHKQVGEMFIVCGVLYALDSATDRDSKVTVAIDLYRSKPVEVSLQFTNPFRKTTQLGYD 114
+N ++ + FI+CGV Y L SA + +++T A DL+R+ + +++ NP++ T L Y+
Sbjct: 508 VNTTEIADSFIMCGVWYGLKSANNLQTQITHAYDLFRNDTIPGQVEWYNPYQGLTMLHYN 567
Query: 113 HTHKELYSWDKGNQLTYPVRYNE 45
LY +D + L+ VR E
Sbjct: 568 PLDARLYFFDNSSLLSVNVRIEE 590
>U00050-3|AAL02480.1| 556|Caenorhabditis elegans Hypothetical
protein F09F7.5c protein.
Length = 556
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2
Query: 545 ANESGQPGEIIRYDLTQSRIKSAHLPYADGRLYTSQHN 432
++ESG P I R+ L RIKSA +P + GR+ +S N
Sbjct: 410 SDESGVPPAIARF-LYDKRIKSATMPMSIGRMTSSSGN 446
>U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical
protein F09F7.5b protein.
Length = 582
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2
Query: 545 ANESGQPGEIIRYDLTQSRIKSAHLPYADGRLYTSQHN 432
++ESG P I R+ L RIKSA +P + GR+ +S N
Sbjct: 409 SDESGVPPAIARF-LYDKRIKSATMPMSIGRMTSSSGN 445
>U00050-1|AAA50697.1| 583|Caenorhabditis elegans Hypothetical
protein F09F7.5a protein.
Length = 583
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2
Query: 545 ANESGQPGEIIRYDLTQSRIKSAHLPYADGRLYTSQHN 432
++ESG P I R+ L RIKSA +P + GR+ +S N
Sbjct: 410 SDESGVPPAIARF-LYDKRIKSATMPMSIGRMTSSSGN 446
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -2
Query: 485 KSAHLPYADGRLYTSQHNQVDFSADDNGLWAI-YSIESSNNTAVAKLSFDPNKDSLNIDY 309
KSAH+PY D +L + + ++ L + Y+ + N K++ DP KD+L ++
Sbjct: 289 KSAHIPYRDSKLTRLLQDSLGGNSKTETLGTLRYANRAKNIKNQPKINEDP-KDALLREF 347
Query: 308 VWNISLNHKQV 276
I + +Q+
Sbjct: 348 QEEIEMLREQL 358
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -2
Query: 485 KSAHLPYADGRLYTSQHNQVDFSADDNGLWAI-YSIESSNNTAVAKLSFDPNKDSLNIDY 309
KSAH+PY D +L + + ++ L + Y+ + N K++ DP KD+L ++
Sbjct: 252 KSAHIPYRDSKLTRLLQDSLGGNSKTETLGTLRYANRAKNIKNQPKINEDP-KDALLREF 310
Query: 308 VWNISLNHKQV 276
I + +Q+
Sbjct: 311 QEEIEMLREQL 321
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -3
Query: 532 DNRARSSDTTSHRAELNQHIFRTLMDDCTLHNITRWILALTTTDYGPS 389
D+R + +D QH+ +T + D L N T+W + + P+
Sbjct: 756 DSRNQLADKRGMMKNKLQHVLKTRLADFELTNATQWTTLINWCSWNPT 803
>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
protein F18A1.1 protein.
Length = 1075
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -2
Query: 485 KSAHLPYADGRLYTSQHNQVDFSADDNGLWAIYSIESSNNTAVAKLSFDPNKDSLNIDYV 306
K A LP + R + N +F+ + + +W+I + + + + KL+ K N+ V
Sbjct: 51 KRAILPLKEFRRLPNGRNNREFTVNWDNIWSIRNFITRSGKILKKLTLLNFKSPENVKDV 110
Query: 305 WN 300
W+
Sbjct: 111 WH 112
>U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical
protein T07H6.1a protein.
Length = 702
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/81 (20%), Positives = 34/81 (41%)
Frame = -2
Query: 572 VYGGSFFYQANESGQPGEIIRYDLTQSRIKSAHLPYADGRLYTSQHNQVDFSADDNGLWA 393
++GGSF + ++G E+I ++ I + Y G L + D + G+W
Sbjct: 133 IHGGSFLAGSADTGIDMEVIAANIVSKGIAFVSINYRLGPLGFMNYQNGDKLEGNFGIWD 192
Query: 392 IYSIESSNNTAVAKLSFDPNK 330
+ + + + + DP K
Sbjct: 193 MVMALQWIQSNIKQFNGDPTK 213
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 538 SRDNRARSSDTTSHRAELNQHIFRTLMDDCTLHNITRWILALTT 407
SR N + T H AE+ +HI R + + T + +T L L T
Sbjct: 53 SRSNSRMLEELTRHAAEIKEHINRQRVLESTRNELTDKNLELET 96
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 538 SRDNRARSSDTTSHRAELNQHIFRTLMDDCTLHNITRWILALTT 407
SR N + T H AE+ +HI R + + T + +T L L T
Sbjct: 53 SRSNSRMLEELTRHAAEIKEHINRQRVLESTRNELTDKNLELET 96
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 538 SRDNRARSSDTTSHRAELNQHIFRTLMDDCTLHNITRWILALTT 407
SR N + T H AE+ +HI R + + T + +T L L T
Sbjct: 53 SRSNSRMLEELTRHAAEIKEHINRQRVLESTRNELTDKNLELET 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,379,432
Number of Sequences: 27780
Number of extensions: 326135
Number of successful extensions: 866
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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