Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_H09
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical pr...    33   0.13 
AC006744-1|AAF60506.2|  328|Caenorhabditis elegans Serpentine re...    32   0.30 
AL132862-13|CAB60543.1|  385|Caenorhabditis elegans Hypothetical...    31   0.93 
U21323-10|AAW30670.1|  805|Caenorhabditis elegans Hypothetical p...    29   2.8  
U21323-9|AAA62553.1|  971|Caenorhabditis elegans Hypothetical pr...    29   2.8  

>U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical
           protein F21C10.12 protein.
          Length = 349

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -2

Query: 525 FMFLFVESNILLLLYLSTTKYIYFFYGIMFNELMKY 418
           F  +   SNIL+++++ TT +IY+F+   F  ++ Y
Sbjct: 272 FEVMIEVSNILIVIHIGTTFFIYYFFSARFRNILCY 307


>AC006744-1|AAF60506.2|  328|Caenorhabditis elegans Serpentine
           receptor, class t protein52 protein.
          Length = 328

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -3

Query: 548 GSILIHQVLCFYLLKVTYYCYSI*VQRNIYIFSTVLCLMN 429
           G+I+++   CF++ K T   Y +   +N++I ST++C +N
Sbjct: 211 GTIVLYGAYCFFMAKKTMG-YKVSAGKNVFIQSTLICSIN 249


>AL132862-13|CAB60543.1|  385|Caenorhabditis elegans Hypothetical
           protein Y73F8A.18 protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 485 SNSNMLLSTNKNIKLDVSKCYLIKMKCNIAMNKCPVTESSSL*TSDSAYDR 637
           S S +    N+N+KLDVS CY ++    +  +  P  +  S     S  +R
Sbjct: 302 SVSVVFTDNNENLKLDVSNCYKLRNDLGMTTDLSPTFDGESCDNKSSKLNR 352


>U21323-10|AAW30670.1|  805|Caenorhabditis elegans Hypothetical
           protein C45G9.10b protein.
          Length = 805

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 416 KYFINSLNIIP*KKY---IYFVVLK*SNSNMLLSTNKNIKLDVSKCYLIKMKCNIAMNKC 586
           KY+IN   II  +K    + F V K +   +L+S++K   LDV++ +  K    +  N C
Sbjct: 531 KYYINGETIILEEKQSGSLIFDVPKNAIVTILISSSKCSDLDVNREFANKFSYQVLENVC 590

Query: 587 P 589
           P
Sbjct: 591 P 591


>U21323-9|AAA62553.1|  971|Caenorhabditis elegans Hypothetical
           protein C45G9.10a protein.
          Length = 971

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 416 KYFINSLNIIP*KKY---IYFVVLK*SNSNMLLSTNKNIKLDVSKCYLIKMKCNIAMNKC 586
           KY+IN   II  +K    + F V K +   +L+S++K   LDV++ +  K    +  N C
Sbjct: 697 KYYINGETIILEEKQSGSLIFDVPKNAIVTILISSSKCSDLDVNREFANKFSYQVLENVC 756

Query: 587 P 589
           P
Sbjct: 757 P 757


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,345,818
Number of Sequences: 27780
Number of extensions: 192430
Number of successful extensions: 384
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)