Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_H07
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   9.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.5  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 322  SSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASE 456
            + NY  + H+    Q Q Q  QH+HE +      +A      AS+
Sbjct: 895  AENYRQQ-HQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEASQ 938


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
 Frame = -2

Query: 361 RNGVCESRRSSCCYPE----LDEQDLPARPRY 278
           +NG CE+R    C+      LDE+     P Y
Sbjct: 85  QNGTCETRPGGSCFVSVEAVLDEETKQLVPEY 116


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = -3

Query: 399 FMLVLMALKLTLGVMVFVNLDGVVAAI 319
           FML L+A+++ + ++VFV L  ++AAI
Sbjct: 140 FMLKLIAIRMLVNLVVFVIL--LLAAI 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,534
Number of Sequences: 2352
Number of extensions: 12426
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)