Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_H07
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 29 3.2
Z68159-4|CAA92285.1| 323|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical... 28 5.6
U13019-7|AAC24445.2| 689|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 37.9 bits (84), Expect = 0.005
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Frame = -3
Query: 573 GLAVHLQFADIETVLSETSFRVAPVACMIVXXXXXXXXXXXXXXXIRESNCMLVTYAIFM 394
G + L+F ++ +L + P+ +++ IRE+ C+ V++A+ +
Sbjct: 31 GSILQLKFDNVLDILGDERL-ATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLL 89
Query: 393 LVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQDQDTFHVIE-----HR-FSCCGPTG 232
+L+ ++ ++ + D I N + + ++ V H+ F CCG T
Sbjct: 90 ALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRGVESAWDKTHQLFECCGVTN 149
Query: 231 PGSYLSL-TLPITCC 190
+L+ T+P +CC
Sbjct: 150 SSDWLTFTTIPDSCC 164
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 32.3 bits (70), Expect = 0.26
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 388 VDGTETDLGRNGVCESRRSSCCYPELDEQDLP 293
+DG+ D+ +G C +R+S+C DE+ +P
Sbjct: 288 IDGSVIDIAHSGACRARKSTCITCPKDEKKIP 319
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 301 LVHPVRDSSNYS--VEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEECNDES 474
+VH V+ + S +++H H + F H + V H G E+ +DE+
Sbjct: 498 VVHHVQTEAQQSPVIDVHSTHVVE-HFDTHDESPQSPVLSVHG-----GEEGYEDHHDEA 551
Query: 475 DAPNNHTGHRRYSE 516
+ HT H+ +SE
Sbjct: 552 PVLSVHTDHKAHSE 565
>Z68159-4|CAA92285.1| 323|Caenorhabditis elegans Hypothetical
protein C33D9.4 protein.
Length = 323
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -3
Query: 408 YAIFMLVLMALKLT-LGVMVFVNLDGVVAAIPNWMNKTFQQDQDTFHVIEHRFSCCGPTG 232
Y F V+ A+ L+ + +FV V+ W +K D+ F I F C
Sbjct: 17 YFTFSTVIAAIPLSYMPPTIFVMFKIVLTY---WKSKNVSMDRHIFTFISINFFCSLSFF 73
Query: 231 PGSYLSLTLPITCCSTTPCTVI 166
Y +TLP T T+ C +
Sbjct: 74 FSDYFRITLPATGIFTSWCASV 95
>AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical
protein F45C12.3 protein.
Length = 470
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 23 LRAWFARHRAKMTATNSMAAITMATEPIA 109
++ WF RH+AK + TN +T EP A
Sbjct: 163 IKQWFWRHKAKQSTTNYQQRVT--AEPYA 189
>U13019-7|AAC24445.2| 689|Caenorhabditis elegans Hypothetical
protein T12A2.6 protein.
Length = 689
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 390 VLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQDQDTFHVIEHR 256
VL+ TLG F L + IP MN +++D + + EHR
Sbjct: 210 VLVTCHHTLGPENFGKLGDFLEIIPFQMNGMYRKDSEFLYFYEHR 254
>Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical
protein Y53C12A.1 protein.
Length = 677
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 385 DGTETDLGRNGVCESRRSSCCYPELDEQDLPAR 287
D + D C S SS P+LDE + P R
Sbjct: 479 DNDQDDDEEQATCSSSNSSAIEPQLDEPESPPR 511
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 288 DQDTFHVIEHRFSCCGPTGPGSYLSLTLPITCCSTTPCTVINAYAGCTEVLQ 133
+Q TF + + SC P S + ++P+TC ST C+ AGC LQ
Sbjct: 2723 EQGTFQNVSNSDSCI-PCSDLSENATSIPVTCQST--CSDAIPTAGCNCQLQ 2771
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = -3
Query: 429 SNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAIPNWMNKTFQQD-------QDTFH 271
+ C L + +++ L+L V +F + + + + M T + +D F
Sbjct: 82 NQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYSSETAFKDAFD 141
Query: 270 VIEHRFSCCG 241
++ +F CCG
Sbjct: 142 TVQEKFECCG 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,173,460
Number of Sequences: 27780
Number of extensions: 257456
Number of successful extensions: 910
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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