Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_H07
(581 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 64 1e-12
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 0.95
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.7
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 23 2.9
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 5.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 5.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 5.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 5.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.1
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 5.1
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 64.1 bits (149), Expect = 1e-12
Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 12/200 (6%)
Frame = -3
Query: 573 GLAVHLQFADIETVLSETSFRVAPVACMIVXXXXXXXXXXXXXXXIRESNCMLVTYAIFM 394
G+ +HLQ + + ET + +++ IRES+CM +T+A F+
Sbjct: 30 GVLIHLQILGVSKQI-ETGLAFPSITLIVLGSIIFVISFFGCCGAIRESHCMTITFASFL 88
Query: 393 LVLMALKLTLGVMVFV------NLDGVVAAIPNWMNKTF--QQDQDTFHVIEHRFSCCGP 238
L ++ +++ + V F+ N + N F + +D I+ CCG
Sbjct: 89 LFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSESKDFIDFIQKNLQCCGV 148
Query: 237 TGPGSYLSLTLPITCCST---TPCTVINAYA-GCTEVLQALFNNYXXXXXXXXXXXXXXX 70
Y +P +CC++ C++ N+Y GC E L+
Sbjct: 149 HSLSDYNDKPIPASCCNSPENNTCSISNSYTNGCVEALKDTVKLAGTVFGSVAIAIAIVE 208
Query: 69 XXXXIFALCLANHARNKMRR 10
I ALCLAN +N RR
Sbjct: 209 LIGIICALCLANSIKNAERR 228
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.2 bits (50), Expect = 0.95
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -2
Query: 526 RDQLQSSAGGLYDCWGHRFHHCILRMLRCHQG 431
RD + + GG+Y H HH + H G
Sbjct: 263 RDSRRKNYGGVYHLDNHHVHHANHHAILGHSG 294
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -2
Query: 469 HHCILRMLRCHQGEQLHACHL-RDLHAGVD 383
+HC L CH G L L R LH ++
Sbjct: 127 NHCELHRAACHSGSSLTKSRLMRCLHHDIE 156
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 454 RMLRCHQGEQLHACHL 407
R LR H GE+ +AC L
Sbjct: 55 RHLRVHTGERPYACEL 70
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 460 CNDESDAPNNHTGHRRYSEAGL*QHSLYVSE 552
CN+E T +RYS + + + Y +E
Sbjct: 23 CNEEEKLLEERTSRKRYSRSREREQNSYKNE 53
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 460 CNDESDAPNNHTGHRRYSEAGL*QHSLYVSE 552
CN+E T +RYS + + + Y +E
Sbjct: 23 CNEEEKLLEERTSRKRYSRSREREQNSYKNE 53
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 460 CNDESDAPNNHTGHRRYSEAGL*QHSLYVSE 552
CN+E T +RYS + + + Y +E
Sbjct: 23 CNEEEKLLEERTSRKRYSRSREREQNSYKNE 53
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 460 CNDESDAPNNHTGHRRYSEAGL*QHSLYVSE 552
CN+E T +RYS + + + Y +E
Sbjct: 23 CNEEEKLLEERTSRKRYSRSREREQNSYKNE 53
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 46 QSEDDGHQFNGGDHDGDRAD 105
+ DDG N GD RAD
Sbjct: 194 RDSDDGSDGNDGDESSCRAD 213
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 351 TPLRPRSVSVPSTP 392
TPL+PR S+ S+P
Sbjct: 892 TPLQPRFYSISSSP 905
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,310
Number of Sequences: 438
Number of extensions: 2801
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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