Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_H06
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...   113   5e-27
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.1  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   4.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.5  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score =  113 bits (272), Expect = 5e-27
 Identities = 49/61 (80%), Positives = 53/61 (86%)
 Frame = -1

Query: 660 GTLTDGXKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGH 481
           GTL DG  FDSSR RGKPFKF +GK EVIRGWDEGVA+MSVG+RAKL CSPDYAYG +GH
Sbjct: 29  GTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGH 88

Query: 480 P 478
           P
Sbjct: 89  P 89



 Score = 36.3 bits (80), Expect = 9e-04
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -2

Query: 491 SKATXGVIPPNSTLIFDVELLRLE 420
           S+   GVIPPN+ L FDVELLR+E
Sbjct: 85  SRGHPGVIPPNARLTFDVELLRVE 108


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 483 HPWSHTSQLYTYFRCRTSTSRINTICNQKLLQHHCYVNCP 364
           H  SHT Q      C  S SRI+T+ +   ++H   +N P
Sbjct: 542 HFHSHTPQRSLCPYCPASYSRIDTLRSHLRIKHADRLNAP 581


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 483 HPWSHTSQLYTYFRCRTSTSRINTICNQKLLQHHCYVNCP 364
           H  SHT Q      C  S SRI+T+ +   ++H   +N P
Sbjct: 518 HFHSHTPQRSLCPYCPASYSRIDTLRSHLRIKHADRLNAP 557


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 410 FVTKNYYNIIVMSIAL*NXKSQLITLFFIT 321
           FVT    N IV+ I   N + + +T FFIT
Sbjct: 147 FVTAVIGNSIVLFIVQSNPRMRTVTNFFIT 176


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 591 GKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPWSHTSQLYTYFRCRTSTSRINT 412
           GK    R   + ++K S      L+ S   +  +     S TSQ  +  + RTS SR  T
Sbjct: 401 GKKRSSRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRT 460


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,422
Number of Sequences: 2352
Number of extensions: 11165
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)