Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_H06
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   4.5  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 600 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 508
           FRI   E  R W     K+ + +  KL C P
Sbjct: 249 FRIQVDECDRLWILDSGKVDIAKGGKLACPP 279


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 533 SPTDIFATPSSQPRITSDFPIL 598
           +PT + ++P S+ +   D P+L
Sbjct: 600 APTSVCSSPRSEDKEVEDMPVL 621


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 52  FETISDY*NKYRYNYP 99
           ++TI DY +KY+ N P
Sbjct: 421 YKTILDYYHKYKENLP 436


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 52  FETISDY*NKYRYNYP 99
           ++TI DY +KY+ N P
Sbjct: 421 YKTILDYYHKYKENLP 436


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 537  GERAKLTCSPDYAYGQQG 484
            GER  L  S DY Y  +G
Sbjct: 1579 GERVMLKASEDYRYSVRG 1596


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 52 FETISDY*NKYRYNYP 99
          ++TI DY +KY+ N P
Sbjct: 47 YKTILDYYHKYKENLP 62


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 132 NDKMLLRNVSVVR*NRIDDLQN 197
           N K L+RN   V  N+ D++QN
Sbjct: 404 NVKELIRNTHCVNNNQNDNIQN 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,064
Number of Sequences: 438
Number of extensions: 3243
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)