Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_G23
         (561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.9  
AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione S-tran...    23   9.0  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
 Frame = -3

Query: 547 SRRSQSPLDTAYYGLDHRGTPVGASDDESN--SRSATATPHSIVQMPDEPANMYENTSXK 374
           SR S      +       G  +G    ES   +RSA  T HSIV  P+     Y  T+ K
Sbjct: 632 SRHSSYTSHQSRISYTSHGDLLGGMTKESRLRNRSARNTNHSIVPPPNANNLSYAETNHK 691


>AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 222

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 173 PITLVXTSGPSHSRRWERVDPPSANP 250
           PI+L+ + G  H   +  V+P    P
Sbjct: 41  PISLIKSGGEQHCNEYREVNPMEQVP 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,593
Number of Sequences: 2352
Number of extensions: 9362
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)