Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_G23
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58726-7|AAP13770.1| 562|Caenorhabditis elegans Amp-activated k... 30 1.3
U58726-6|AAM69095.1| 624|Caenorhabditis elegans Amp-activated k... 30 1.3
U58726-5|AAM69096.1| 626|Caenorhabditis elegans Amp-activated k... 30 1.3
AY347273-1|AAR06928.1| 624|Caenorhabditis elegans AMP-activated... 30 1.3
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 1.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 1.7
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69717-2|CAA93532.2| 204|Caenorhabditis elegans Hypothetical pr... 28 5.3
>U58726-7|AAP13770.1| 562|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform c protein.
Length = 562
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = -3
Query: 475 SDDESNSRSATATPHSIVQMPDEPANMYENTSXKRTDGLQGSQAPRXSFKAVEI 314
+D+ES S SA+++ H+ + MP +PA + RT + + + S + +E+
Sbjct: 473 ADEESGSASASSSRHASMSMPQKPAGI----RGTRTSSMPQAMSMEASIEKMEV 522
>U58726-6|AAM69095.1| 624|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform a protein.
Length = 624
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = -3
Query: 475 SDDESNSRSATATPHSIVQMPDEPANMYENTSXKRTDGLQGSQAPRXSFKAVEI 314
+D+ES S SA+++ H+ + MP +PA + RT + + + S + +E+
Sbjct: 535 ADEESGSASASSSRHASMSMPQKPAGI----RGTRTSSMPQAMSMEASIEKMEV 584
>U58726-5|AAM69096.1| 626|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform b protein.
Length = 626
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = -3
Query: 475 SDDESNSRSATATPHSIVQMPDEPANMYENTSXKRTDGLQGSQAPRXSFKAVEI 314
+D+ES S SA+++ H+ + MP +PA + RT + + + S + +E+
Sbjct: 537 ADEESGSASASSSRHASMSMPQKPAGI----RGTRTSSMPQAMSMEASIEKMEV 586
>AY347273-1|AAR06928.1| 624|Caenorhabditis elegans AMP-activated
protein kinase alphasubunit 1 protein.
Length = 624
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = -3
Query: 475 SDDESNSRSATATPHSIVQMPDEPANMYENTSXKRTDGLQGSQAPRXSFKAVEI 314
+D+ES S SA+++ H+ + MP +PA + RT + + + S + +E+
Sbjct: 535 ADEESGSASASSSRHASMSMPQKPAGI----RGTRTSSMPQAMSMEASIEKMEV 584
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 511 YGLDHRGTPVGASDDESNSRSATATPHSIVQMPDEPANMYENTSXKRT--DGLQGSQAPR 338
+ LDH + ES SR + P + +P++PAN + ++ GL+ S +
Sbjct: 134 FPLDHADSTSSVLSQESRSRRGSNAPFAKDGLPEQPANPFAQLKKVKSGAGGLEKSDS-M 192
Query: 337 XSFKAVEISK 308
S K +++ K
Sbjct: 193 ASLKKLDLKK 202
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 511 YGLDHRGTPVGASDDESNSRSATATPHSIVQMPDEPANMYENTSXKRT--DGLQGSQAPR 338
+ LDH + ES SR + P + +P++PAN + ++ GL+ S +
Sbjct: 673 FPLDHADSTSSVLSQESRSRRGSNAPFAKDGLPEQPANPFAQLKKVKSGAGGLEKSDS-M 731
Query: 337 XSFKAVEISK 308
S K +++ K
Sbjct: 732 ASLKKLDLKK 741
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 511 YGLDHRGTPVGASDDESNSRSATATPHSIVQMPDEPANMYENTSXKRT--DGLQGSQAPR 338
+ LDH + ES SR + P + +P++PAN + ++ GL+ S +
Sbjct: 134 FPLDHADSTSSVLSQESRSRRGSNAPFAKDGLPEQPANPFAQLKKVKSGAGGLEKSDS-M 192
Query: 337 XSFKAVEISK 308
S K +++ K
Sbjct: 193 ASLKKLDLKK 202
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 511 YGLDHRGTPVGASDDESNSRSATATPHSIVQMPDEPANMYENTSXKRT--DGLQGSQAPR 338
+ LDH + ES SR + P + +P++PAN + ++ GL+ S +
Sbjct: 673 FPLDHADSTSSVLSQESRSRRGSNAPFAKDGLPEQPANPFAQLKKVKSGAGGLEKSDS-M 731
Query: 337 XSFKAVEISK 308
S K +++ K
Sbjct: 732 ASLKKLDLKK 741
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -3
Query: 550 ASRRSQSPLDTAYYGLDHRGTPVGASDDESNSRSATATPHSIVQMPDEPANMYENTS 380
+SRR+Q P+ Y G + + S+S S P V P ++Y TS
Sbjct: 463 SSRRNQEPITITYIGRPRTPSEGDVASTVSSSTSRNRRPSPSVAKKTSPPSIYAITS 519
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 27.9 bits (59), Expect = 5.3
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = -3
Query: 487 PVG--ASDDESNSRSATATPHSIVQMPDEP--ANMYENTSXKR--TDGLQGSQAPRXSFK 326
PVG +S+ S+S AT IVQ +P N+ N S R T + P K
Sbjct: 603 PVGRPSSEASSSSNQPEATTQQIVQNSSDPNSPNVNTNPSKNRNTTSNSNYIELPIDEGK 662
Query: 325 AVEISKQTPNYDHDXNKYXQESTFA 251
E++ + +Y D N Y +S A
Sbjct: 663 IDEVN-EALSYPEDSNDYFLKSMMA 686
>Z69717-2|CAA93532.2| 204|Caenorhabditis elegans Hypothetical
protein E01G6.2 protein.
Length = 204
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 547 SRRSQSPLDTAYYGLDHRGTPVGASDDESNSRSATA 440
S R++SP T+ Y LD R + GAS S S T+
Sbjct: 157 SVRAKSPEPTSSYSLDGRDSGRGASSPSSTMSSTTS 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,569,580
Number of Sequences: 27780
Number of extensions: 199762
Number of successful extensions: 561
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -