Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_G19
         (373 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   2.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   2.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.2  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 141 PEARPQLPTHTAQVEEASPQATPPPTV 61
           P    Q+P   A ++++ P  +  PTV
Sbjct: 106 PSYSMQVPQQGASIDDSDPDPSSEPTV 132


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 141 PEARPQLPTHTAQVEEASPQATPPPTV 61
           P    Q+P   A ++++ P  +  PTV
Sbjct: 554 PSYSMQVPQQGASIDDSDPDPSSEPTV 580


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/36 (25%), Positives = 15/36 (41%)
 Frame = +2

Query: 68  GGGVACGDASSTCAVCVGNCGRASGTTCGPTSPSEE 175
           GG     + +  C   + + G  S   CGP +  +E
Sbjct: 146 GGANLNLNGTVNCTSSIASSGVVSAGECGPAADVDE 181


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 12/55 (21%), Positives = 20/55 (36%)
 Frame = -2

Query: 222 MTSHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPPPTVD 58
           ++S H   PH   +  ++   +             T T    + +   TPPP VD
Sbjct: 641 LSSTHSH-PHEPGAPATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPPQVD 694



 Score = 20.2 bits (40), Expect = 8.2
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = +2

Query: 50  RSGSTVGGGVACGDASSTCAVCVGNCGRASGTTCGPTSPS 169
           R  S  G   A   A+ T          AS T  GP +PS
Sbjct: 203 RDESKAGSTDASTPATVTTTGATTTLPAASATGTGPATPS 242


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,560
Number of Sequences: 438
Number of extensions: 1804
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)