Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_G05
         (745 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0092 + 17851085-17851346,17852778-17852860,17853891-178539...    29   5.2  
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398...    28   9.0  
01_01_0056 + 422141-422379,422524-422620,422697-422774,422871-42...    28   9.0  

>05_04_0092 +
           17851085-17851346,17852778-17852860,17853891-17853942,
           17854054-17854179,17854291-17854373,17855127-17855309,
           17855731-17855947,17856156-17856299,17856375-17856446,
           17857166-17857230,17857517-17857584,17857968-17858007,
           17858843-17859013
          Length = 521

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 577 PFVVPWMDRDSRHSQLKSQPKHIHPSXELRLNIVQCLSQVG 699
           P VV W D +      K+Q    HPS     N +Q  S  G
Sbjct: 207 PLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFG 247


>01_01_0543 +
           3985771-3985866,3985965-3986145,3986668-3986780,
           3986854-3987190,3987602-3987603,3987661-3987743,
           3988017-3988116,3988330-3988463,3988711-3988788,
           3989333-3989387,3990159-3990239,3990369-3990567,
           3990609-3990699,3990770-3990892,3991440-3991528,
           3992450-3992539,3992619-3992792,3992911-3993035,
           3993246-3993372,3993826-3993998
          Length = 816

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -2

Query: 252 SGTNYHITKSVINLLYVSEMRLGDITLDLALAGREPENSSLEDF 121
           SG N H  +      Y   ++LG IT DL  A R  +  ++ DF
Sbjct: 211 SGGNNHAIEHYEQTKYPLAVKLGTITADLEAAERHKKLENVNDF 254


>01_01_0056 +
           422141-422379,422524-422620,422697-422774,422871-422930,
           423019-423123,423743-423856,424145-424186,424380-424496,
           424568-424755,425502-425785,425869-425990,426118-426160,
           426265-426356,427331-427379,427623-427693,427793-427912,
           428586-428674,429266-429311,429926-429973
          Length = 667

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 336 YCTIGTRNQTIQWLRALENKPMTPSPAASGTNYHITKSVINLLYVSEMR 190
           Y T GT +   +W+R LE+  +     A   NY +T   ++ L   E++
Sbjct: 471 YSTNGTTSCNFEWVRHLEDGSVNFIEGARQPNYLVTADDVDTLLAIEVQ 519


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,901,908
Number of Sequences: 37544
Number of extensions: 386840
Number of successful extensions: 813
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)