Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_F22
         (475 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010181-1|AAH10181.1|   82|Homo sapiens DPH3, KTI11 homolog (S....    74   2e-13
BC063804-1|AAH63804.1|  148|Homo sapiens DPH4 protein protein.         33   0.67 
AL137804-1|CAM28214.1|  149|Homo sapiens zinc finger, CSL-type c...    33   0.67 

>BC010181-1|AAH10181.1|   82|Homo sapiens DPH3, KTI11 homolog (S.
           cerevisiae) protein.
          Length = 82

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 32/64 (50%), Positives = 40/64 (62%)
 Frame = -2

Query: 360 MTIFHXXXXXXXXXXXXXXXXXXYPCPCGDRFQISKEELMAGEEVATCPSCSLVVKVIYD 181
           M +FH                  YPCPCGD F I+KE+L  GE+VATCPSCSL++KVIYD
Sbjct: 1   MAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYD 60

Query: 180 LEKF 169
            ++F
Sbjct: 61  KDQF 64


>BC063804-1|AAH63804.1|  148|Homo sapiens DPH4 protein protein.
          Length = 148

 Score = 32.7 bits (71), Expect = 0.67
 Identities = 13/36 (36%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
 Frame = -2

Query: 285 CPCGDRFQISKEELMAGEEVA--TCPSCSLVVKVIY 184
           C CG ++ +SK+E    EEV+  +C +CSL++++++
Sbjct: 114 CRCGGKYSVSKDE---AEEVSLISCDTCSLIIELLH 146


>AL137804-1|CAM28214.1|  149|Homo sapiens zinc finger, CSL-type
           containing 3 protein.
          Length = 149

 Score = 32.7 bits (71), Expect = 0.67
 Identities = 13/36 (36%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
 Frame = -2

Query: 285 CPCGDRFQISKEELMAGEEVA--TCPSCSLVVKVIY 184
           C CG ++ +SK+E    EEV+  +C +CSL++++++
Sbjct: 115 CRCGGKYSVSKDE---AEEVSLISCDTCSLIIELLH 147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,420,659
Number of Sequences: 237096
Number of extensions: 758957
Number of successful extensions: 1103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)