Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_F20
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.2  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   9.6  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   9.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 523 SFIAGRNDKFKISFHGSSSTTQICLMLYNL 434
           + I G  D +   F+GS  T    ++ YNL
Sbjct: 364 NIIEGNADSYNTEFYGSIDTLARKILGYNL 393


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 523 SFIAGRNDKFKISFHGSSSTTQICLMLYNL 434
           + I G  D +   F+GS  T    ++ YNL
Sbjct: 364 NIIEGNADSYNTEFYGSIDTLARKILGYNL 393


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 498 LSFLPAMKLKSNECSVR 548
           ++FLP    + + CSVR
Sbjct: 6   VAFLPVKSFRESRCSVR 22


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -2

Query: 319 FVVINLSFALRPPPWTYASKTSSASTRIDTRAWLMRWIPP 200
           F  I + F LR     +   T   S  I   +W+  WI P
Sbjct: 200 FTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKP 239


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 20  ILINIITSRVNMYPSCCVINVH 85
           +L  +I   ++++ + CV+NVH
Sbjct: 316 LLFTMILVTLSIWITVCVLNVH 337


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 238 IDTRAWLMRWIPPSPSWL 185
           ID R W  R+ P S  W+
Sbjct: 71  IDKRPWWERYQPISYKWI 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,468
Number of Sequences: 438
Number of extensions: 3586
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)