Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_F14
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 197 6e-51
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 196 2e-50
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 196 2e-50
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 193 1e-49
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 192 3e-49
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 192 3e-49
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 129 5e-34
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 95 5e-20
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 29 2.6
04_04_1588 - 34633057-34633824 28 6.0
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 197 bits (481), Expect = 6e-51
Identities = 94/127 (74%), Positives = 106/127 (83%)
Frame = -2
Query: 675 PESKVFYLKMKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLA 496
PESKVFYLKMKGD YRYLAE TG R E++ AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 181
Query: 495 LNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 316
LNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 182 LNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 241
Query: 315 TQGDGDE 295
D E
Sbjct: 242 ISEDTAE 248
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 196 bits (477), Expect = 2e-50
Identities = 96/130 (73%), Positives = 106/130 (81%), Gaps = 1/130 (0%)
Frame = -2
Query: 672 ESKVFYLKMKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLAL 493
ESKVFYLKMKGD +RYLAE TG R E + AY+ A +I+ A + PTHPIRLGLAL
Sbjct: 117 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLAL 176
Query: 492 NFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD- 316
NFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 177 NFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDL 236
Query: 315 TQGDGDEPAE 286
T+ GDE E
Sbjct: 237 TEDGGDEVKE 246
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 196 bits (477), Expect = 2e-50
Identities = 92/120 (76%), Positives = 104/120 (86%)
Frame = -2
Query: 675 PESKVFYLKMKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLA 496
PESKVFYLKMKGD YRYLAE TG R E++ AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 399
Query: 495 LNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 316
LNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 400 LNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 459
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 193 bits (470), Expect = 1e-49
Identities = 90/126 (71%), Positives = 104/126 (82%)
Frame = -2
Query: 672 ESKVFYLKMKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLAL 493
ESKVFYLKMKGD +RYLAE +G+ R E + AY+ A +I+ A + PTHPIRLGLAL
Sbjct: 100 ESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLAL 159
Query: 492 NFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDT 313
NFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 160 NFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDA 219
Query: 312 QGDGDE 295
DG +
Sbjct: 220 NDDGGD 225
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 192 bits (467), Expect = 3e-49
Identities = 90/126 (71%), Positives = 104/126 (82%)
Frame = -2
Query: 672 ESKVFYLKMKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLAL 493
++KVFYLKMKGD +RYLAE TG R + + AYQ A +I+ ++ PTHPIRLGLAL
Sbjct: 127 DAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLAL 186
Query: 492 NFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDT 313
NFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 187 NFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 246
Query: 312 QGDGDE 295
Q DG +
Sbjct: 247 QDDGGD 252
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 192 bits (467), Expect = 3e-49
Identities = 92/126 (73%), Positives = 103/126 (81%)
Frame = -2
Query: 672 ESKVFYLKMKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLAL 493
ESKVFYLKMKGD +RYLAE +G R E++ AY+ A +I+ A + THPIRLGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLAL 181
Query: 492 NFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDT 313
NFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 182 NFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDN 241
Query: 312 QGDGDE 295
DG +
Sbjct: 242 AEDGGD 247
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 129 bits (312), Expect(2) = 5e-34
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = -2
Query: 555 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 376
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 375 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 277
KDSTLIMQLLRDNL LW SD D D+ E D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238
Score = 33.1 bits (72), Expect(2) = 5e-34
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2
Query: 645 KGDXYRYLAEVATGETRHSVVEDSQKAYQ 559
KGD YRYLAE TG + V E S AY+
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 95.1 bits (226), Expect = 5e-20
Identities = 54/122 (44%), Positives = 77/122 (63%)
Frame = -2
Query: 672 ESKVFYLKMKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLAL 493
E+ VF+ KMKGD YRYLAE +TG + + + S AYQ A+ ++
Sbjct: 114 ENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQL-------------- 158
Query: 492 NFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDT 313
FS+ EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+MQLL++NL LWTS+
Sbjct: 159 -FSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL 215
Query: 312 QG 307
G
Sbjct: 216 TG 217
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -2
Query: 486 SVFYYEILNSPDKACQLAKQAFDDAIAEL-DTLNEDSYKDSTLIMQLLRD-NLTLWTSDT 313
S Y + PD + K++FD+ + E + +Y S + ++ D LWT +
Sbjct: 676 SFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGEL 735
Query: 312 QGDGDEPAEGGDN*YLAA 259
D ++ +GG+N Y+ A
Sbjct: 736 I-DMEKVTQGGENLYIRA 752
>04_04_1588 - 34633057-34633824
Length = 255
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 238 KCVCWGECGEILVVAALGRLVAIALSV*RPK 330
+CVCW +++ ALG I +V +PK
Sbjct: 68 RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,087,906
Number of Sequences: 37544
Number of extensions: 331376
Number of successful extensions: 916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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