Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_F13
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227...    31   0.55 
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991...    31   0.73 
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029...    31   0.96 
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044...    30   1.3  
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445...    28   5.1  

>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
            18122824-18123105,18123159-18123292,18123425-18123508,
            18123611-18123901,18123982-18124314,18124620-18124750,
            18124826-18124930,18125011-18125167,18125248-18125351,
            18125442-18125602,18125800-18126116,18126369-18126650,
            18127011-18127312,18127609-18127699,18127771-18127824,
            18128110-18128186,18128279-18128438,18128545-18128629,
            18129059-18129367,18129514-18129890
          Length = 1507

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 244  LNIVL*RHTIFSYLIYESIYFDFITKTKYAWYLYTVYF 131
            L  VL +  ++  ++Y  I F++  K K+ WYLY +YF
Sbjct: 1341 LPYVLVQSAVYGVIVYAMIGFEWEAK-KFFWYLYFMYF 1377


>09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,
            9919056-9919283,9919628-9919761,9919842-9919925,
            9920007-9920297,9920569-9920901,9921029-9921171,
            9921266-9921379,9921470-9921626,9921709-9921812,
            9921914-9922074,9922158-9922474,9922574-9922855,
            9923205-9923506,9923603-9923693,9923864-9923917,
            9924052-9924128,9924213-9924372,9924473-9924557,
            9924635-9924723,9925791-9925925
          Length = 1341

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 244  LNIVL*RHTIFSYLIYESIYFDFITKTKYAWYLYTVYF 131
            L  +L +  I+  L+Y  I F++ T  K+ WYL+ +YF
Sbjct: 1176 LPYILVQSLIYGVLVYAMIGFEW-TAAKFFWYLFFMYF 1212


>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
            13504409-13504497,13504612-13504696,13504852-13505011,
            13505096-13505160,13505296-13505349,13505437-13505527,
            13505685-13505986,13506084-13506365,13506451-13506764,
            13506920-13507080,13507202-13507305,13507379-13507535,
            13507652-13507896,13507995-13508327,13508428-13508751,
            13508816-13508899,13509001-13509169,13509610-13509731,
            13510538-13510792,13511115-13511252
          Length = 1377

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 244  LNIVL*RHTIFSYLIYESIYFDFITKTKYAWYLYTVYF 131
            L  +L +  ++  L+Y  I F++ T  K+ WYL+ +YF
Sbjct: 1252 LPYILVQTLVYGVLVYSMIGFEW-TVAKFIWYLFFMYF 1288


>01_05_0662 - 24103475-24103735,24103831-24104085,24104280-24104451,
            24104535-24104762,24104864-24104997,24105101-24105184,
            24105273-24105563,24105660-24105992,24106081-24106334,
            24106435-24106591,24106674-24106777,24106879-24107039,
            24107216-24107529,24107614-24107895,24107991-24108292,
            24108367-24108457,24108566-24108619,24108785-24108861,
            24108963-24109207,24109322-24109410,24110811-24111254
          Length = 1443

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 217  IFSYLIYESIYFDFITKTKYAWYLYTVYF 131
            I+  L+Y  I F++ T  K+ WYL+ +YF
Sbjct: 1286 IYGVLVYSMIGFEW-TVAKFLWYLFFMYF 1313


>01_05_0658 - 24043655-24043945,24044003-24044257,24044359-24044530,
            24044617-24044844,24045688-24045821,24045908-24045991,
            24046202-24046492,24046571-24046903,24047002-24047246,
            24047476-24047742,24048305-24048465,24048556-24048872,
            24048966-24049247,24049325-24049626,24049699-24049789,
            24049881-24049934,24050028-24050104,24050192-24050367,
            24051331-24051540,24051626-24052029
          Length = 1457

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 217  IFSYLIYESIYFDFITKTKYAWYLYTVYF 131
            I+S ++Y  I F + T  K+ WYL+ ++F
Sbjct: 1290 IYSIIVYSMIGFQW-TVAKFFWYLFFMFF 1317


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,003,528
Number of Sequences: 37544
Number of extensions: 224046
Number of successful extensions: 357
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)