Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_F09
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 527  SVNKILSNN-SYHKNAEKASIYLQSTLEPQRQILHWIELVIKTGGAPQLRSPALLQLTT 354
            SVNK+       +K   K +  L+   E  R +   IE + K    P LRSPA+  +TT
Sbjct: 1080 SVNKLFKCMICTYKADNKENEQLRKIQESLRDLNRKIESLEKMQ-YPDLRSPAVSNVTT 1137


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 527  SVNKILSNN-SYHKNAEKASIYLQSTLEPQRQILHWIELVIKTGGAPQLRSPALLQLTT 354
            SVNK+       +K   K +  L+   E  R +   IE + K    P LRSPA+  +TT
Sbjct: 1080 SVNKLFKCMICTYKADNKENEQLRKIQESLRDLNRKIESLEKMQ-YPDLRSPAVSNVTT 1137


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/17 (41%), Positives = 15/17 (88%)
 Frame = -3

Query: 237 ERLDFLYTVMFIVSIGL 187
           ++LDF++T + +++IGL
Sbjct: 443 KKLDFIFTFITLLTIGL 459


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 601 MVTN*SWYNGMPMTGTP 651
           M+ N  W+ GM  +G+P
Sbjct: 462 MLLNEGWHKGMDESGSP 478


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,570
Number of Sequences: 336
Number of extensions: 3877
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)