Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_F09
         (812 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   7.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 731 LRILNHNNTVLLITNGGTTSLLEAAYFGVPVI 636
           L+ +  NN  L + +GG+       Y  VP+I
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVPII 458


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 731 LRILNHNNTVLLITNGGTTSLLEAAYFGVPVI 636
           L+ +  NN  L + +GG+       Y  VP+I
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVPII 458


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 731 LRILNHNNTVLLITNGGTTSLLEAAYFGVPVI 636
           L+ +  NN  L + +GG+       Y  VP+I
Sbjct: 427 LKAIKENNADLTVVSGGSVLRATKEYNTVPII 458


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 525 REQDSKQQ*LPQKRRKSLNLPSEHTRAPTTN 433
           ++Q  +QQ  PQ++++      +  R P TN
Sbjct: 831 QQQQQQQQQQPQQQQQQQQQQQQQQRGPMTN 861



 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -3

Query: 612  IRDHGFSSREKTRDQSQIQ*AYRTEDQGFREQDSKQQ*LPQKRRK 478
            I DH     ++ + Q Q Q   + + Q   +Q  +QQ  PQ++++
Sbjct: 1492 IVDHSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQ 1536


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 391 GAPPVFITSSIQWRICRWG 447
           G P V + S+  WR   WG
Sbjct: 541 GGPLVMVCSAPVWRFQPWG 559


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,735
Number of Sequences: 438
Number of extensions: 4921
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)