Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_F08
         (783 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z28407-1|CAA82248.1|  257|Homo sapiens ribosomal protein L8 prot...    62   2e-09
CR457046-1|CAG33327.1|  257|Homo sapiens RPL8 protein.                 62   2e-09
BT007379-1|AAP36043.1|  257|Homo sapiens ribosomal protein L8 pr...    62   2e-09
BC093064-1|AAH93064.1|  257|Homo sapiens ribosomal protein L8 pr...    62   2e-09
BC013104-1|AAH13104.1|  257|Homo sapiens ribosomal protein L8 pr...    62   2e-09
BC012197-1|AAH12197.1|  257|Homo sapiens ribosomal protein L8 pr...    62   2e-09
BC000077-1|AAH00077.1|  257|Homo sapiens ribosomal protein L8 pr...    62   2e-09
BC000047-1|AAH00047.2|  211|Homo sapiens RPL8 protein protein.         62   2e-09
AB061821-1|BAB79459.1|  257|Homo sapiens ribosomal protein L8 pr...    62   2e-09

>Z28407-1|CAA82248.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 207 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240


>CR457046-1|CAG33327.1|  257|Homo sapiens RPL8 protein.
          Length = 257

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 207 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240


>BT007379-1|AAP36043.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 207 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240


>BC093064-1|AAH93064.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 207 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240


>BC013104-1|AAH13104.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 207 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240


>BC012197-1|AAH12197.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 207 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240


>BC000077-1|AAH00077.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 207 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240


>BC000047-1|AAH00047.2|  211|Homo sapiens RPL8 protein protein.
          Length = 211

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 161 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 194


>AB061821-1|BAB79459.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 783 VEHPXGGGNHQHIGKASTVKRGTSAGRKVGLIAA 682
           VEHP GGGNHQHIGK ST++R   AGRKVGLIAA
Sbjct: 207 VEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,074,697
Number of Sequences: 237096
Number of extensions: 2204646
Number of successful extensions: 3294
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3294
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)