Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_E17
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 285 3e-77
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 130 1e-30
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 124 9e-29
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 113 2e-25
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 111 7e-25
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 91 8e-19
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 40 0.001
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 29 2.8
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 29 2.8
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 29 2.8
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 29 4.8
AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine re... 28 6.4
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 285 bits (698), Expect = 3e-77
Identities = 132/212 (62%), Positives = 169/212 (79%)
Frame = -2
Query: 764 RYDRAITVFSPDGHLLQVXYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEXRTVRK 585
RYDRAIT+FSPDGHL QV YAQEAV+KGSTA VEKKS+ LQ+ RT+RK
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 584 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 405
I ++DDHV++AFAGL+ADAR+L++RA+IECQS+KLT+EDPVT+ YI+RYIA KQ++TQS
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQS 122
Query: 404 NGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEV 225
GRRPFGIS LIGGFD+DG+P LF+TEPSG YYE+ ANATGR K VRE+LE+ Y+ +
Sbjct: 123 PGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENT 182
Query: 224 ATENGAVKLAIRALLEVVQSGQKNLEIAVMRR 129
E +KL +++L +VV G +N+EIAVM++
Sbjct: 183 VDEATTLKLVVKSLAQVVPPGSQNIEIAVMKK 214
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 130 bits (313), Expect = 1e-30
Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 6/218 (2%)
Frame = -2
Query: 767 ARYDRAITVFSPDGHLLQVXYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEXRTVR 588
+ YDR + FSP+G L QV YA EAV+ GST+ EK+S +KL +
Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIE 65
Query: 587 KICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY-- 414
KI +D H+ + FAGL AD+R L+ RAQIE Q+ T + +E +T+ +A L ++
Sbjct: 66 KISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGD 125
Query: 413 --TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNY 240
+++ RPFG++ L G D +G+ LF +PSG + + KA + G ++ + L++ Y
Sbjct: 126 DDVKASMSRPFGVAMLFAGVDQEGA-KLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQY 184
Query: 239 TADEVATENGAVKLAIRALLEVVQS--GQKNLEIAVMR 132
D + + G +K+A+ L +V++ N+E+ V++
Sbjct: 185 -HDALTIKEG-LKMALAILKQVMEEKLNSANVEVVVIK 220
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 124 bits (298), Expect = 9e-29
Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 3/223 (1%)
Frame = -2
Query: 764 RYDRAITVFSPDGHLLQVXYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEXRTV-R 588
RYD T+FSP+G L QV YA EA+ T E+K+V KL + +
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTE 63
Query: 587 KICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQ 408
K+ L D++ AG+TADA ILIN + S++ + + + +E + + + KQ+YTQ
Sbjct: 64 KVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQ 123
Query: 407 SNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADE 228
G+RPFG+S L G+D L+Q++PSG Y WKA G + + L++ Y +
Sbjct: 124 IGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPN 183
Query: 227 VATENGAVKLAIRALLEV--VQSGQKNLEIAVMRRGQPMQMLD 105
+ A +LAI+ L + V+ + +E+AV+ R +L+
Sbjct: 184 L---EEAKQLAIKVLWKTLDVKLASEKVEMAVLTRRDGKTVLE 223
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 113 bits (271), Expect = 2e-25
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 4/212 (1%)
Frame = -2
Query: 761 YDRAITVFSPDGHLLQVXYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEXRTVRKI 582
Y ++T FSP G L+Q+ YA AV+ G + E + V +I
Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLTDDQPKVEQI 64
Query: 581 CLLDDHVVMAFAGLTADARILINRAQ-IECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 405
H+ ++G+ D RIL+ +A+ I + + E+ T++ +T IA + Q+YTQS
Sbjct: 65 ---SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQEYTQS 120
Query: 404 NGRRPFGISCLIGGFDYD-GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADE 228
G RPFG S LI G+D + G P LFQ +PSG Y+ WKA A G++ + FLEK ++ E
Sbjct: 121 GGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFS--E 178
Query: 227 VATENGAVKLAIRALLEVVQSG--QKNLEIAV 138
+ + A+ L E G + N+E+AV
Sbjct: 179 ALELDDGIHTALLTLRESFDVGMNENNVEVAV 210
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 111 bits (266), Expect = 7e-25
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 4/224 (1%)
Frame = -2
Query: 764 RYDRAITVFSPDGHLLQVXYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEXRTVRK 585
+YD +TV+SP G L QV YA EA+++GS K++ L + +K
Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KK 62
Query: 584 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 405
+ +D H ++ AGL +D RIL Q EC S + + V ++ + + Q TQ
Sbjct: 63 VYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQY 122
Query: 404 NGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEV 225
GRRPFG+ LI G+D DG+ H+ QT+PS + G +++ R +LE+N E
Sbjct: 123 YGRRPFGVGILIAGYDKDGA-HIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEK 181
Query: 224 ATENGAVKLAIRALLEVVQSGQ----KNLEIAVMRRGQPMQMLD 105
+T + A+ AL + + + + +N I ++ + P +L+
Sbjct: 182 STPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLE 225
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 91.1 bits (216), Expect = 8e-19
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Frame = -2
Query: 767 ARYDRAITVFSPDGHLLQVXYAQEAVRKGS-TAXXXXXXXXXXXXVEKKSVAKLQEXRTV 591
A +DR IT+FSP+G + QV YA +A+ + TA V+K+ L TV
Sbjct: 7 AGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTV 66
Query: 590 RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYT 411
+ + V G+ DA+ I RAQ E S K + E + + +A L Q YT
Sbjct: 67 TSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYT 126
Query: 410 QSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTAD 231
Q+ R G + L +D + P +++ +P+G Y K + G FLEK
Sbjct: 127 QNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKK 186
Query: 230 EVATENGAVKLAIRALLEV--VQSGQKNLEIAVMRR 129
T A++LAI AL + K+LE+ V+ +
Sbjct: 187 SELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTK 222
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 79.0 bits (186), Expect = 3e-15
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 1/207 (0%)
Frame = -2
Query: 761 YDRAITVFSPDGHLLQVXYAQEAVRKGSTAXXXXXXXXXXXXVEKKSVAKLQEXRTVRKI 582
YD A + FSPDG + QV YAQ+AV T +K +KL ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 581 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 402
++D+V +A AG D L N A E +P+ ++ I +A +T
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGI 127
Query: 401 GRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVA 222
RPFG ++ LF EPSG+ YE+KA A G+ + + +EK E
Sbjct: 128 S-RPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK--LKIEEL 184
Query: 221 TENGAVKLAIRALLEV-VQSGQKNLEI 144
N VK A R ++ V ++ KN++I
Sbjct: 185 DVNQLVKEAARIIMVVRDENKDKNVQI 211
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 1/169 (0%)
Frame = -2
Query: 707 YAQEAVRKGSTAXXXXXXXXXXXXVEKK-SVAKLQEXRTVRKICLLDDHVVMAFAGLTAD 531
Y QE + G+T + + S R KI + D++V+ +G AD
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 530 ARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYD 351
+ + + A+ + +T PVT+ ++ Y R S L+ G+D +
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNY-----REQLSASVLVAGWDEE 129
Query: 350 GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAV 204
++ G ++ A+G + V+ FL+ + + E A+
Sbjct: 130 LGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAI 178
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -2
Query: 473 EDPVTLEYITRY---IAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEP-SGIYY 306
++P+T E++TRY + Q +T SNGR+ + FD S TEP +G YY
Sbjct: 689 KNPITKEFVTRYTTEVHSKNQSFTDSNGRQ-----AMERFFDGATSFEYSDTEPIAGNYY 743
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = -2
Query: 599 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 420
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 419 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 249
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = -2
Query: 599 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 420
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 419 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 249
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2
Query: 281 RSAKTVREFLEKNYTADEVATENGAVKLAIRA-LLEVVQSGQKNLEIAV 138
+ A L+K+ T D VA +N + K + A LL+V+QSG +NL+ V
Sbjct: 19 QGASDCSSLLKKHLTKDVVA-KNKSKKTRLGATLLDVIQSGGENLDSGV 66
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 278 SAKTVREFLEKNYTADEVATENGAVKL 198
S K VR LEKNYTA++ E V+L
Sbjct: 568 SKKYVRPLLEKNYTANKAKKEGKLVEL 594
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 278 SAKTVREFLEKNYTADEVATENGAVKL 198
S K VR LEKNYTA++ E V+L
Sbjct: 568 SKKYVRPLLEKNYTANKAKKEGKLVEL 594
>AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine
receptor, class z protein70 protein.
Length = 297
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +3
Query: 105 VKHLHWLTSSHYSNF*VLLARLY-YFQECSDSQLDSSILCSNFISSVIFL*KLSYCLCRS 281
VKH W+ + Y F L+ L+ + + S + ++F L CLC
Sbjct: 62 VKHFFWMVRTSYYFFIALIVVLFLQYPPLRNIIFYSLFIIDQTFELLLFSIALEKCLCTF 121
Query: 282 TSCISFPFIIYTRRFSLEQVW*TIIV 359
+ P+ R L+++W IV
Sbjct: 122 FPKLE-PYFTSARNSLLDKIWALYIV 146
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -2
Query: 314 IYYEWKANATGRSAKTVREF----LEKNYTADEVATENGAVKLA 195
++Y K + GR K V + L K TA +V TENG VK A
Sbjct: 124 VWYINKKDKDGRKKKKVGDVISNGLPKTATASDVQTENGNVKKA 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,289,424
Number of Sequences: 27780
Number of extensions: 313385
Number of successful extensions: 832
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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