Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_E12
(457 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118419-1|AAM48448.1| 167|Drosophila melanogaster RE73934p pro... 122 2e-28
AJ276419-1|CAC08819.1| 167|Drosophila melanogaster TBP associat... 122 2e-28
AJ243836-1|CAB55760.2| 167|Drosophila melanogaster TATA binding... 122 2e-28
AE014134-466|AAF51210.1| 167|Drosophila melanogaster CG2859-PA ... 122 2e-28
AY071220-1|AAL48842.1| 146|Drosophila melanogaster RE26329p pro... 121 4e-28
AJ243837-1|CAB55761.1| 146|Drosophila melanogaster TATA binding... 121 4e-28
AJ237968-1|CAB40838.1| 146|Drosophila melanogaster TATA-binding... 121 4e-28
AE014134-465|AAF51211.1| 146|Drosophila melanogaster CG3069-PA ... 121 4e-28
AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p pro... 28 5.2
AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-P... 28 5.2
AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-P... 28 5.2
AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-P... 28 5.2
AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-P... 28 5.2
>AY118419-1|AAM48448.1| 167|Drosophila melanogaster RE73934p
protein.
Length = 167
Score = 122 bits (295), Expect = 2e-28
Identities = 53/109 (48%), Positives = 82/109 (75%), Gaps = 4/109 (3%)
Frame = -3
Query: 320 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 141
+ + + QLE+Y+P+IPD++ + L GF + DP++VRL+++++QKF+SDI NDALQHCK
Sbjct: 57 MDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDALQHCK 116
Query: 140 MRTSN----QINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHY 6
RT+N + SSK++K PK++KY + M+DL PAL ++GIT +KP Y
Sbjct: 117 TRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQY 165
>AJ276419-1|CAC08819.1| 167|Drosophila melanogaster TBP associated
factor TAFII24 protein.
Length = 167
Score = 122 bits (295), Expect = 2e-28
Identities = 53/109 (48%), Positives = 82/109 (75%), Gaps = 4/109 (3%)
Frame = -3
Query: 320 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 141
+ + + QLE+Y+P+IPD++ + L GF + DP++VRL+++++QKF+SDI NDALQHCK
Sbjct: 57 MDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDALQHCK 116
Query: 140 MRTSN----QINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHY 6
RT+N + SSK++K PK++KY + M+DL PAL ++GIT +KP Y
Sbjct: 117 TRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQY 165
>AJ243836-1|CAB55760.2| 167|Drosophila melanogaster TATA binding
protein asssociatedfactor 24kDa subunit, (dTAFII24
protein) protein.
Length = 167
Score = 122 bits (295), Expect = 2e-28
Identities = 53/109 (48%), Positives = 82/109 (75%), Gaps = 4/109 (3%)
Frame = -3
Query: 320 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 141
+ + + QLE+Y+P+IPD++ + L GF + DP++VRL+++++QKF+SDI NDALQHCK
Sbjct: 57 MDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDALQHCK 116
Query: 140 MRTSN----QINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHY 6
RT+N + SSK++K PK++KY + M+DL PAL ++GIT +KP Y
Sbjct: 117 TRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQY 165
>AE014134-466|AAF51210.1| 167|Drosophila melanogaster CG2859-PA
protein.
Length = 167
Score = 122 bits (295), Expect = 2e-28
Identities = 53/109 (48%), Positives = 82/109 (75%), Gaps = 4/109 (3%)
Frame = -3
Query: 320 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 141
+ + + QLE+Y+P+IPD++ + L GF + DP++VRL+++++QKF+SDI NDALQHCK
Sbjct: 57 MDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDALQHCK 116
Query: 140 MRTSN----QINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHY 6
RT+N + SSK++K PK++KY + M+DL PAL ++GIT +KP Y
Sbjct: 117 TRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQY 165
>AY071220-1|AAL48842.1| 146|Drosophila melanogaster RE26329p
protein.
Length = 146
Score = 121 bits (292), Expect = 4e-28
Identities = 55/105 (52%), Positives = 77/105 (73%)
Frame = -3
Query: 320 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 141
L DF+ QLE+Y P IPD+V ++YLN+ GF+S D R+VRLI+LA+QK++SDI++DALQH K
Sbjct: 41 LSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVRLISLAAQKYMSDIIDDALQHSK 100
Query: 140 MRTSNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHY 6
RT Q + K K++K+ +TM+DL PAL +YGI +K Y
Sbjct: 101 ARTHMQTTNTPGGSKA-KDRKFTLTMEDLQPALADYGINVRKVDY 144
>AJ243837-1|CAB55761.1| 146|Drosophila melanogaster TATA binding
protein asssociatedfactor 16kDa subunit, (dTAFII16
protein) protein.
Length = 146
Score = 121 bits (292), Expect = 4e-28
Identities = 55/105 (52%), Positives = 77/105 (73%)
Frame = -3
Query: 320 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 141
L DF+ QLE+Y P IPD+V ++YLN+ GF+S D R+VRLI+LA+QK++SDI++DALQH K
Sbjct: 41 LSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVRLISLAAQKYMSDIIDDALQHSK 100
Query: 140 MRTSNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHY 6
RT Q + K K++K+ +TM+DL PAL +YGI +K Y
Sbjct: 101 ARTHMQTTNTPGGSKA-KDRKFTLTMEDLQPALADYGINVRKVDY 144
>AJ237968-1|CAB40838.1| 146|Drosophila melanogaster TATA-binding
protein associatedfactor TAFII16 protein.
Length = 146
Score = 121 bits (292), Expect = 4e-28
Identities = 55/105 (52%), Positives = 77/105 (73%)
Frame = -3
Query: 320 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 141
L DF+ QLE+Y P IPD+V ++YLN+ GF+S D R+VRLI+LA+QK++SDI++DALQH K
Sbjct: 41 LSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVRLISLAAQKYMSDIIDDALQHSK 100
Query: 140 MRTSNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHY 6
RT Q + K K++K+ +TM+DL PAL +YGI +K Y
Sbjct: 101 ARTHMQTTNTPGGSKA-KDRKFTLTMEDLQPALADYGINVRKVDY 144
>AE014134-465|AAF51211.1| 146|Drosophila melanogaster CG3069-PA
protein.
Length = 146
Score = 121 bits (292), Expect = 4e-28
Identities = 55/105 (52%), Positives = 77/105 (73%)
Frame = -3
Query: 320 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 141
L DF+ QLE+Y P IPD+V ++YLN+ GF+S D R+VRLI+LA+QK++SDI++DALQH K
Sbjct: 41 LSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVRLISLAAQKYMSDIIDDALQHSK 100
Query: 140 MRTSNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHY 6
RT Q + K K++K+ +TM+DL PAL +YGI +K Y
Sbjct: 101 ARTHMQTTNTPGGSKA-KDRKFTLTMEDLQPALADYGINVRKVDY 144
>AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p
protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 131 SNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPH 9
SN +SS + K +++ + +T D+L L+EY + K H
Sbjct: 215 SNNNGESSSSLKKLEDQLHALTSDELYETLKEYDVLQDKFH 255
>AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-PD,
isoform D protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 131 SNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPH 9
SN +SS + K +++ + +T D+L L+EY + K H
Sbjct: 215 SNNNGESSSSLKKLEDQLHALTSDELYETLKEYDVLQDKFH 255
>AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-PC,
isoform C protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 131 SNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPH 9
SN +SS + K +++ + +T D+L L+EY + K H
Sbjct: 215 SNNNGESSSSLKKLEDQLHALTSDELYETLKEYDVLQDKFH 255
>AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-PB,
isoform B protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 131 SNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPH 9
SN +SS + K +++ + +T D+L L+EY + K H
Sbjct: 215 SNNNGESSSSLKKLEDQLHALTSDELYETLKEYDVLQDKFH 255
>AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-PA,
isoform A protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 131 SNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPH 9
SN +SS + K +++ + +T D+L L+EY + K H
Sbjct: 215 SNNNGESSSSLKKLEDQLHALTSDELYETLKEYDVLQDKFH 255
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,843,608
Number of Sequences: 53049
Number of extensions: 354953
Number of successful extensions: 1170
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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