Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_E01
(392 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0045 + 11929624-11929890,11930500-11930551,11932683-119331... 31 0.33
05_03_0154 - 8971367-8971374,8971512-8971595,8971693-8971739,897... 29 1.0
05_03_0153 - 8963364-8963480,8963695-8963754,8963984-8964079,896... 29 1.0
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 29 1.0
07_03_1574 - 27837041-27837490 29 1.8
04_03_0585 + 17570853-17571404 29 1.8
03_05_0008 - 19543244-19543522 28 2.3
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 28 3.1
11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 28 3.1
08_02_1369 - 26445725-26445812,26446443-26446529,26446720-264469... 28 3.1
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 28 3.1
05_01_0231 - 1730428-1730817 28 3.1
11_06_0631 - 25656885-25657000,25658591-25658658,25658957-256589... 27 4.1
11_02_0016 - 7380933-7382027 27 4.1
09_04_0436 - 17558603-17559265,17559322-17559384 27 4.1
11_08_0069 + 28148713-28148829,28149205-28149327,28149372-28149824 27 5.4
03_05_0441 + 24350026-24350081,24350186-24351011,24351088-243511... 27 5.4
05_07_0219 - 28474661-28475146,28475979-28476644 27 7.1
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 27 7.1
01_02_0091 - 11023912-11024017,11024112-11024185,11024478-110248... 27 7.1
10_08_0782 + 20517103-20519601 26 9.4
09_06_0087 + 20771329-20771450,20771462-20771771,20771893-207726... 26 9.4
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 26 9.4
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 26 9.4
06_01_0781 + 5846501-5847490 26 9.4
>01_03_0045 +
11929624-11929890,11930500-11930551,11932683-11933103,
11933574-11934162
Length = 442
Score = 31.1 bits (67), Expect = 0.33
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 53 VFASVIKFRTCKATCCAMNSSCMARHTTCSSPPSSLRCFSTVRYSRCSDLRTATPHTVSG 232
V ++ RT + C A++ S ++PP R S + + + VS
Sbjct: 322 VACRLLSRRTTRVLCLAISLSNATHRKARATPPKVFESTDRERRSPPTSINPSMRPHVSL 381
Query: 233 ARGPHRGPRATHPRAP 280
+R HR RAT P+ P
Sbjct: 382 SRVAHRKVRATCPKCP 397
>05_03_0154 -
8971367-8971374,8971512-8971595,8971693-8971739,
8972623-8972698,8974263-8974313,8974510-8974873
Length = 209
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -3
Query: 249 RCGPRAPLTVCGVAVRKSLHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIAQHVALQVLN 73
RC RAP C + L R K E G+++ VW A +EE A H L+ L+
Sbjct: 5 RCAERAPELRCARQRSRRLAAPERMKSK--GEIFGMVRRVWNAREEETTAAHQRLRPLS 61
>05_03_0153 -
8963364-8963480,8963695-8963754,8963984-8964079,
8966162-8966422
Length = 177
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -3
Query: 249 RCGPRAPLTVCGVAVRKSLHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIAQHVALQVLN 73
RC RAP C + L R K E G+++ VW A +EE A H L+ L+
Sbjct: 5 RCAERAPELRCARQRSRRLAAPERMKSK--GEIFGMVRRVWNAREEETTAAHQRLRPLS 61
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 29.5 bits (63), Expect = 1.0
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Frame = +2
Query: 134 TCSSPPSSLRCFSTVRYSRCSDL---------RTATPHTVSGARGPHRGPRATHPRA 277
T SP SS + ST R S +D+ TAT T + A G HR PR T R+
Sbjct: 48 TSLSPTSSSQQISTERSSFAADIVDPPPASHNHTATTTTAAAAAGGHRKPRPTTSRS 104
>07_03_1574 - 27837041-27837490
Length = 149
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 285 HGEHAAQFVLAEGGAVAHLV 344
H E AQFV A+GGA H++
Sbjct: 126 HAEKPAQFVAAKGGAARHVI 145
>04_03_0585 + 17570853-17571404
Length = 183
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 235 PGTAPGTARYSPSGAGYMASTRRSSCLLKAAR*HTSSSRTPDATASAT 378
PG + G +PSGA ++T R KA + + + + +P T S+T
Sbjct: 21 PGLSRGDGECNPSGAIRSSTTHRCQDCCKAGQSYPTYTCSPPTTGSST 68
>03_05_0008 - 19543244-19543522
Length = 92
Score = 28.3 bits (60), Expect = 2.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -3
Query: 249 RCGPRAPLTVCGVAVRKSLHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIAQH 94
RC RAP C + L R K E G+++ VW A +EE A H
Sbjct: 5 RCAERAPKLRCAQQRSRRLAAPERMKSKE--EIFGMVRRVWNAREEETTAAH 54
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +2
Query: 131 TTCSSPPSSLRCFSTVRYSRCSDLRTATPHTVSGARGPHRGPRATHPRAPGT 286
T P L CF T+ + PH G R P R R T P P +
Sbjct: 536 TAYGLPHCRLSCFQTISAIQVGWPPRRLPHGRHGRRNPSRRRRPTPPLTPAS 587
>11_02_0059 -
7883980-7884141,7884423-7884467,7884629-7884715,
7885746-7885874,7885995-7886151,7886248-7886350,
7887050-7887103,7887334-7887451,7888549-7888700,
7890166-7891852
Length = 897
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 235 PGTAPGTARYSPSGAGYMASTRRS 306
PGTAP TA+ + +GAG RRS
Sbjct: 29 PGTAPKTAKNAVAGAGGGGQRRRS 52
>08_02_1369 -
26445725-26445812,26446443-26446529,26446720-26446928,
26447501-26447583,26447672-26447720,26447800-26447959,
26448795-26448891,26449424-26449535,26449637-26449702,
26450135-26450206,26450413-26450487,26451139-26451266,
26451551-26451772,26452084-26452355,26452447-26452543,
26452633-26452738,26454834-26455220
Length = 769
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +3
Query: 198 TCALQHRTPSAGPGDRTGDRALLTLGRRVHGEHAAQFVLAEGGAVAHLVL 347
+CA PSA P DR G R +L + + H E Q V A L+L
Sbjct: 389 SCAYTSSAPSAQPHDRQGVRKVLDV--KFHPEGLPQLVSCSNEAPNELLL 436
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 211 NTAHRQRGPGTAPGTARYSPSGAGYMA 291
+TA +RG G P T+R P G G +A
Sbjct: 58 STAPLERGVGPGPATSREQPRGGGDLA 84
>05_01_0231 - 1730428-1730817
Length = 129
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 222 VCGVAVRKS-LHRLYRTVEKHLSEEGGLLQVVWRAMQE 112
+CG ++K LH L R VE + GG+LQ ++QE
Sbjct: 85 LCGEKLKKRYLHELLRDVEPDDHKHGGILQRCKSSLQE 122
>11_06_0631 -
25656885-25657000,25658591-25658658,25658957-25658996,
25659742-25659820,25659918-25661707,25662030-25662037,
25662305-25662367,25662504-25662820
Length = 826
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 101 AMNSSCMARHTTCSSP-PSSLRCFSTVRYSRCSDLRTATPHTV 226
A S+ + C+ P P+S CF + Y RC+ + + P+T+
Sbjct: 76 ASASNFFSSPAACADPHPASRGCFHRIVYRRCNLVTESHPNTL 118
>11_02_0016 - 7380933-7382027
Length = 364
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 128 HTTCSSPPSSLRCFSTVRYSRCSDLRTATPHTVSGA 235
+ T S+P +S R ST R + CS LRT++P + A
Sbjct: 310 YPTPSTPSTSSRS-STSRSTSCSGLRTSSPPAAAAA 344
>09_04_0436 - 17558603-17559265,17559322-17559384
Length = 241
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 256 ARYSPSGAGYMASTRRSSCLLKAAR*HTSSSRTPDATASATPS 384
A S + AG A+TR L A+ TSSS TP ASATP+
Sbjct: 139 ATESQACAGSPAATRPLR-LASASPSTTSSSATPPPNASATPT 180
>11_08_0069 + 28148713-28148829,28149205-28149327,28149372-28149824
Length = 230
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 240 PRAPLTVCGVAVRKSLHRLYRTVEK 166
PR P T C + RK HR ++EK
Sbjct: 41 PRLPTTACALMRRKKTHRTKLSLEK 65
>03_05_0441 +
24350026-24350081,24350186-24351011,24351088-24351189,
24351278-24351343,24351418-24351483,24351594-24351800,
24351925-24352086
Length = 494
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 195 ATCALQHRTPSAGPGDRTGDRALLTLGRRVHGEHAAQFVLAEGG 326
A+C+ Q A GD GD + L RR G A + A GG
Sbjct: 144 ASCSRQQTMSLADGGDNAGDLSELVRARRSSGGAARRKAEAGGG 187
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 337 TSSSRTPDATASATPS 384
TSSSRT ATA+ATP+
Sbjct: 95 TSSSRTATATATATPT 110
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2
Query: 122 ARHTTCSSPPSSLRCFSTVRYSRCSDLRTATPHTVSGARGPHRGPRATHPRAP 280
+R + S P S RY R D R P G G GPR + R P
Sbjct: 6 SRSRSYSPQPRRRYSRSPPRYKRYDDPRDRYPRGGGGGGGGGEGPRRGYGRPP 58
>01_02_0091 -
11023912-11024017,11024112-11024185,11024478-11024834,
11024938-11025166,11025468-11025559,11026099-11026326,
11027108-11027356,11027429-11027471,11027589-11027836,
11027922-11028035,11028122-11028322,11028417-11028593,
11028725-11028853,11029210-11029287,11029369-11029464,
11029563-11029634,11031549-11031677,11032105-11032220,
11033048-11033204,11033343-11033426,11033513-11033574,
11034901-11035067,11035162-11035226,11035315-11035371,
11035547-11035633,11036638-11036703,11036810-11036908
Length = 1193
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 152 SSLRCFSTVRYSRCSDLRTATPHTVSGARGPHRGPRATHPR 274
+S+ ++VRY C +RT TP++ S H GP P+
Sbjct: 393 ASIDDITSVRYDVCGIVRTVTPNSKSMVTLTH-GPENVKPQ 432
>10_08_0782 + 20517103-20519601
Length = 832
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 386 FEGVAEAVASGVREDEVCYRAAFSKHELRRVLA 288
FEG+AEAV G R + AA S +R++ A
Sbjct: 562 FEGIAEAVIGGRRTEGASSSAARSVRLVRKLAA 594
>09_06_0087 +
20771329-20771450,20771462-20771771,20771893-20772672,
20772854-20774002
Length = 786
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 134 TCSSPPSSLRCFSTVRYSR-CS-DLRTATPHTVSGARGPHR 250
+CS PP+ RC+ R C D+ P V A P R
Sbjct: 83 SCSQPPTCYRCWYPGHIERNCKVDIDATLPRKVPAAAAPKR 123
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 261 LLTLGRRVHGEHAAQFVLAEGGAVAHLVLAHAG 359
L+ G+++ + A+ EGG+V HLVLA G
Sbjct: 119 LIYAGKQLADDKTAKDYNIEGGSVLHLVLALRG 151
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 261 LLTLGRRVHGEHAAQFVLAEGGAVAHLVLAHAG 359
L+ G+++ + A+ EGG+V HLVLA G
Sbjct: 147 LIYAGKQLADDKTAKDYNIEGGSVLHLVLALRG 179
>06_01_0781 + 5846501-5847490
Length = 329
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 285 HGEHAAQFVL--AEGGAVAHLVLAHAGRH 365
HG+ + F+ + GG +AH V A AG H
Sbjct: 160 HGDFSRVFLAGASAGGNIAHYVAARAGEH 188
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,572,210
Number of Sequences: 37544
Number of extensions: 187795
Number of successful extensions: 756
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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