Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_E01
(392 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical pr... 49 1e-06
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 0.90
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 0.90
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 0.90
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 28 2.7
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 28 2.7
AC024775-7|AAK68451.1| 251|Caenorhabditis elegans Hypothetical ... 28 2.7
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 27 3.6
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z49911-8|CAD59151.1| 250|Caenorhabditis elegans Hypothetical pr... 27 6.3
X58982-1|CAA41731.1| 498|Caenorhabditis elegans degenerin protein. 27 6.3
U58726-8|AAB00580.3| 768|Caenorhabditis elegans Mechanosensory ... 27 6.3
U53669-1|AAC47265.1| 768|Caenorhabditis elegans MEC-4 protein. 27 6.3
Z93387-5|CAB54299.3| 134|Caenorhabditis elegans Hypothetical pr... 26 8.4
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 26 8.4
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 26 8.4
AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical... 26 8.4
AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical... 26 8.4
AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical... 26 8.4
AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid... 26 8.4
>U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical
protein F52E4.7 protein.
Length = 848
Score = 48.8 bits (111), Expect = 1e-06
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -3
Query: 216 GVAVRKSLHRLYRTVEKHLSEEGGLLQVVWRAMQEEFIAQ 97
G V+K L +LY+ +EK+L LLQVVWR MQE+F+ Q
Sbjct: 772 GKEVKKGLEQLYKKIEKNLVANSSLLQVVWRDMQEQFVKQ 811
Score = 33.9 bits (74), Expect = 0.042
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -1
Query: 356 GVREDEVCYRAAFSKHELRRVLAMYPAPE 270
G+R DE+ Y+ FS+ EL++V++ +P E
Sbjct: 746 GIRPDEISYQQQFSRIELKKVISQHPGKE 774
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 0.90
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 241 TAPGTARYSPSGAGYMASTRRSSCLLKAAR*HTSS-SRTPDATASATP 381
T+P TA SPS G +S SS A +SS S +P A +S TP
Sbjct: 17 TSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTP 64
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.5 bits (63), Expect = 0.90
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 241 TAPGTARYSPSGAGYMASTRRSSCLLKAAR*HTSS-SRTPDATASATP 381
T+P TA SPS G +S SS A +SS S +P A +S TP
Sbjct: 224 TSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTP 271
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 0.90
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 241 TAPGTARYSPSGAGYMASTRRSSCLLKAAR*HTSS-SRTPDATASATP 381
T+P TA SPS G +S SS A +SS S +P A +S TP
Sbjct: 224 TSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTP 271
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 365 VASGVREDEVCYRAAFSKHELRRVLAMYPAPEGE*RAVPGAVP 237
+ + +E V AAF HEL R++ +P+ EG+ A +VP
Sbjct: 157 IETSAKEPPVNVDAAF--HELVRIVRSFPSDEGDHEASMASVP 197
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 365 VASGVREDEVCYRAAFSKHELRRVLAMYPAPEGE*RAVPGAVP 237
+ + +E V AAF HEL R++ +P+ EG+ A +VP
Sbjct: 157 IETSAKEPPVNVDAAF--HELVRIVRSFPSDEGDHEASMASVP 197
>AC024775-7|AAK68451.1| 251|Caenorhabditis elegans Hypothetical
protein Y41D4A.1 protein.
Length = 251
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 74 FRTCKATCCAMNSSCMARHTTCSSPPSSLRCFSTVRYSRCSDLRT 208
+ TC C SC A C S P++ F + +RC RT
Sbjct: 199 YGTCGNGICPNGFSCQANGNCCPSCPNNQTPFGSCVANRCGGGRT 243
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 215 PHTVSGARGPHRGPRATHPRAPGTW 289
P + P R P A H RAP TW
Sbjct: 478 PRGIPPRSAPIRAPPAAHGRAPDTW 502
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +2
Query: 68 IKFRTCKATCCAMNSSCMARHTTCSSPPSSLR--CFST--VRYSRCSDLRTATPHTVSGA 235
I+ C C+ + CM C+ PP + C +T V C+ +R + T A
Sbjct: 271 IQITPCSTMKCSAGTECMEVQKNCTEPPCGFQGVCVNTTEVPVGGCATMRCSAGTTCQEA 330
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +2
Query: 68 IKFRTCKATCCAMNSSCMARHTTCSSPPSSLR--CFST--VRYSRCSDLRTATPHTVSGA 235
I+ C C+ + CM C+ PP + C +T V C+ +R + T A
Sbjct: 336 IQITPCSTMKCSAGTECMEVQKNCTEPPCGFQGVCVNTTEVPVGGCATMRCSAGTTCQEA 395
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 83 CKATCCAMNSSCMARHTTCSSPPSSLRCFSTVRYSRCSDL 202
C + + SC + + CSS ++ C T + + CS+L
Sbjct: 81 CTSITISSGPSCSSCQSACSSACTTPTCIRTCQRNSCSNL 120
>Z49911-8|CAD59151.1| 250|Caenorhabditis elegans Hypothetical
protein M28.10 protein.
Length = 250
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 134 TCSSPPSSLRCFSTVRYSRCSDLRTATPHTVSGA 235
TC SPPS++ + + SD+ T P T +G+
Sbjct: 139 TCFSPPSTIAPSTIAPSTTASDVSTVNPVTDNGS 172
>X58982-1|CAA41731.1| 498|Caenorhabditis elegans degenerin protein.
Length = 498
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 168 KHLSEEGGLLQVVWRAMQEEFIAQHVALQVLNLMTD 61
KH E G +++V + + E + + A +NL+ D
Sbjct: 409 KHYKENGAMVEVFYEQLNFEMLTESEAYGFVNLLAD 444
>U58726-8|AAB00580.3| 768|Caenorhabditis elegans Mechanosensory
abnormality protein4 protein.
Length = 768
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 168 KHLSEEGGLLQVVWRAMQEEFIAQHVALQVLNLMTD 61
KH E G +++V + + E + + A +NL+ D
Sbjct: 679 KHYKENGAMVEVFYEQLNFEMLTESEAYGFVNLLAD 714
>U53669-1|AAC47265.1| 768|Caenorhabditis elegans MEC-4 protein.
Length = 768
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 168 KHLSEEGGLLQVVWRAMQEEFIAQHVALQVLNLMTD 61
KH E G +++V + + E + + A +NL+ D
Sbjct: 679 KHYKENGAMVEVFYEQLNFEMLTESEAYGFVNLLAD 714
>Z93387-5|CAB54299.3| 134|Caenorhabditis elegans Hypothetical
protein T02E9.5 protein.
Length = 134
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +2
Query: 116 CMARHTTCSSPPSSLRCFSTVRYSRCSDLRTATPHTVSGA 235
C + + C T +YS C++L T T T + A
Sbjct: 68 CKVKESECQPTDDGRSGLGTCKYSNCTELITTTTTTTTPA 107
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 206 TATPHTVSGARGPHRGPRATHPRAPG 283
+A P T GA P R P+A++ APG
Sbjct: 1098 SAPPPTSYGAPTPQRPPQASYGAAPG 1123
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 206 TATPHTVSGARGPHRGPRATHPRAPG 283
+A P T GA P R P+A++ APG
Sbjct: 1118 SAPPPTSYGAPTPQRPPQASYGAAPG 1143
>AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical
protein Y37D8A.23c protein.
Length = 433
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 300 AQFVLAEGGAVAHLVLAHAGRHRL 371
A + A GGA+A+L +A RH+L
Sbjct: 84 ADGIFAPGGAIANLYAMNAARHQL 107
>AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical
protein Y37D8A.23b protein.
Length = 445
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 300 AQFVLAEGGAVAHLVLAHAGRHRL 371
A + A GGA+A+L +A RH+L
Sbjct: 159 ADGIFAPGGAIANLYAMNAARHQL 182
>AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical
protein Y37D8A.23a protein.
Length = 508
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 300 AQFVLAEGGAVAHLVLAHAGRHRL 371
A + A GGA+A+L +A RH+L
Sbjct: 159 ADGIFAPGGAIANLYAMNAARHQL 182
>AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid
decarboxylase protein.
Length = 508
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 300 AQFVLAEGGAVAHLVLAHAGRHRL 371
A + A GGA+A+L +A RH+L
Sbjct: 159 ADGIFAPGGAIANLYAMNAARHQL 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,552,051
Number of Sequences: 27780
Number of extensions: 140375
Number of successful extensions: 539
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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