Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_D21
         (383 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126234-1|AAI26235.1|  105|Homo sapiens NADH dehydrogenase (ubi...    35   0.078
BC126232-1|AAI26233.1|  105|Homo sapiens NADH dehydrogenase (ubi...    35   0.078
BC104672-1|AAI04673.1|   89|Homo sapiens NDUFB1 protein protein.       35   0.078
BC009691-1|AAH09691.2|   69|Homo sapiens NDUFB1 protein protein.       35   0.078
AF050638-1|AAD42054.1|   58|Homo sapiens NADH-ubiquinone oxidore...    35   0.078

>BC126234-1|AAI26235.1|  105|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 1, 7kDa protein.
          Length = 105

 Score = 35.1 bits (77), Expect = 0.078
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = -1

Query: 125 VPMTGFFIGKFLDDQETXRMTSFRDKSALFGGRVKEGDPPT 3
           VPM GF IG +LD +   R+T+FR+KS LF   ++  +  T
Sbjct: 64  VPM-GFVIGCYLDRKSDERLTAFRNKSMLFKRELQPSEEVT 103


>BC126232-1|AAI26233.1|  105|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 1, 7kDa protein.
          Length = 105

 Score = 35.1 bits (77), Expect = 0.078
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = -1

Query: 125 VPMTGFFIGKFLDDQETXRMTSFRDKSALFGGRVKEGDPPT 3
           VPM GF IG +LD +   R+T+FR+KS LF   ++  +  T
Sbjct: 64  VPM-GFVIGCYLDRKSDERLTAFRNKSMLFKRELQPSEEVT 103


>BC104672-1|AAI04673.1|   89|Homo sapiens NDUFB1 protein protein.
          Length = 89

 Score = 35.1 bits (77), Expect = 0.078
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = -1

Query: 125 VPMTGFFIGKFLDDQETXRMTSFRDKSALFGGRVKEGDPPT 3
           VPM GF IG +LD +   R+T+FR+KS LF   ++  +  T
Sbjct: 48  VPM-GFVIGCYLDRKSDERLTAFRNKSMLFKRELQPSEEVT 87


>BC009691-1|AAH09691.2|   69|Homo sapiens NDUFB1 protein protein.
          Length = 69

 Score = 35.1 bits (77), Expect = 0.078
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = -1

Query: 125 VPMTGFFIGKFLDDQETXRMTSFRDKSALFGGRVKEGDPPT 3
           VPM GF IG +LD +   R+T+FR+KS LF   ++  +  T
Sbjct: 28  VPM-GFVIGCYLDRKSDERLTAFRNKSMLFKRELQPSEEVT 67


>AF050638-1|AAD42054.1|   58|Homo sapiens NADH-ubiquinone
           oxidoreductase MNLL subunit protein.
          Length = 58

 Score = 35.1 bits (77), Expect = 0.078
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = -1

Query: 125 VPMTGFFIGKFLDDQETXRMTSFRDKSALFGGRVKEGDPPT 3
           VPM GF IG +LD +   R+T+FR+KS LF   ++  +  T
Sbjct: 17  VPM-GFVIGCYLDRKSDERLTAFRNKSMLFKRELQPSEEVT 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,825,344
Number of Sequences: 237096
Number of extensions: 1254541
Number of successful extensions: 5692
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5692
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)