Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_D17
(757 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 308 4e-84
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 308 4e-84
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 308 4e-84
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 308 4e-84
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 303 2e-82
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 308 bits (757), Expect = 4e-84
Identities = 143/168 (85%), Positives = 153/168 (91%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 298 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 357
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATT 7
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT
Sbjct: 358 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATT 405
Score = 146 bits (354), Expect = 3e-35
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
C V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREH EKPI V +VF QDEM
Sbjct: 157 CKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEM 216
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
IDC+ TSRWHTKKLPRKTH+G
Sbjct: 217 IDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 247
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 308 bits (757), Expect = 4e-84
Identities = 143/168 (85%), Positives = 153/168 (91%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 284
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 285 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 344
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATT 7
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT
Sbjct: 345 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATT 392
Score = 146 bits (354), Expect = 3e-35
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
C V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREH EKPI V +VF QDEM
Sbjct: 144 CKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEM 203
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
IDC+ TSRWHTKKLPRKTH+G
Sbjct: 204 IDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 308 bits (757), Expect = 4e-84
Identities = 143/168 (85%), Positives = 153/168 (91%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 284
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 285 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 344
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATT 7
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT
Sbjct: 345 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATT 392
Score = 146 bits (354), Expect = 3e-35
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
C V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREH EKPI V +VF QDEM
Sbjct: 144 CKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEM 203
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
IDC+ TSRWHTKKLPRKTH+G
Sbjct: 204 IDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 308 bits (757), Expect = 4e-84
Identities = 143/168 (85%), Positives = 153/168 (91%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 298 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 357
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATT 7
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT
Sbjct: 358 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATT 405
Score = 146 bits (354), Expect = 3e-35
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
C V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREH EKPI V +VF QDEM
Sbjct: 157 CKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEM 216
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
IDC+ TSRWHTKKLPRKTH+G
Sbjct: 217 IDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 247
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 303 bits (743), Expect = 2e-82
Identities = 140/165 (84%), Positives = 150/165 (90%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGK
Sbjct: 249 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 308
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
VIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR
Sbjct: 309 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 368
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAA
Sbjct: 369 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAA 413
Score = 146 bits (354), Expect = 3e-35
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
C V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREH EKPI V +VF QDEM
Sbjct: 168 CKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEM 227
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
IDC+ TSRWHTKKLPRKTH+G
Sbjct: 228 IDCVGVTKGKGFKGVTSRWHTKKLPRKTHKG 258
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,795,019
Number of Sequences: 53049
Number of extensions: 808694
Number of successful extensions: 2001
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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