Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_D17
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 234 6e-62
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 234 6e-62
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 234 6e-62
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 234 6e-62
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 234 6e-62
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 234 6e-62
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 234 6e-62
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 234 6e-62
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 137 bits (332), Expect = 7e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
CS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREH EK + VD+VFAQDEM
Sbjct: 157 CSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM 216
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
ID I TSRWHTKKLPRKTH+G
Sbjct: 217 IDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 137 bits (332), Expect = 7e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
CS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREH EK + VD+VFAQDEM
Sbjct: 157 CSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM 216
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
ID I TSRWHTKKLPRKTH+G
Sbjct: 217 IDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 137 bits (332), Expect = 7e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
CS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREH EK + VD+VFAQDEM
Sbjct: 59 CSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM 118
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
ID I TSRWHTKKLPRKTH+G
Sbjct: 119 IDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -1
Query: 595 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 137 bits (332), Expect = 7e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
CS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREH EK + VD+VFAQDEM
Sbjct: 157 CSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM 216
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
ID I TSRWHTKKLPRKTH+G
Sbjct: 217 IDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 137 bits (332), Expect = 7e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
CS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREH EK + VD+VFAQDEM
Sbjct: 59 CSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM 118
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
ID I TSRWHTKKLPRKTH+G
Sbjct: 119 IDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -1
Query: 595 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
V A +MID I TSRWHTKKLPRKTH+G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -2
Query: 510 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 331
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 330 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 151
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 150 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 16
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 137 bits (332), Expect = 7e-33
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = -1
Query: 754 CSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHXEKPIPVDSVFAQDEM 575
CS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREH EK + VD+VFAQDEM
Sbjct: 157 CSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM 216
Query: 574 IDCIXXXXXXXXXXXTSRWHTKKLPRKTHQG 482
ID I TSRWHTKKLPRKTH+G
Sbjct: 217 IDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 699 KRRLTLWKSNLTVVPSRTK*NGPENXWRNLSL 604
K RL L K +V S K GP+ W N+ L
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPL 504
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,712,491
Number of Sequences: 27780
Number of extensions: 414580
Number of successful extensions: 1179
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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