Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_D13
(771 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 75 1e-14
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 54 3e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 49 8e-07
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 48 2e-06
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 46 6e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 46 6e-06
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 43 6e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 42 1e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 42 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 38 0.002
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.002
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 34 0.020
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 33 0.045
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 30 0.42
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 2.2
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 27 3.9
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 5.2
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 5.2
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 26 6.9
SPAC8C9.06c |||mitochondrial translation regulator |Schizosaccha... 26 6.9
SPBC577.14c |spa1|spa|ornithine decarboxylase antizyme Spa1|Schi... 26 6.9
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 9.1
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 25 9.1
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 74.9 bits (176), Expect = 1e-14
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Frame = -1
Query: 633 CGYACGTNGELRQHRAIHSDDKPFVCD--KCDKTFKTYSNLKTHMDIHEDTS-YECFI-- 469
CG L QH HS+++PFVCD C K F S+LK H H + + C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 468 CRRVLNSRRTLRKHLLVHEDKCRHVCSY--CNKAFKRRQTLKVHM---YTHTGVKPLTCK 304
C +++ L +H+ VH + C++ C++ F + Q L+ H+ +TH P T +
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQ 149
Query: 303 LCDERFAYASTLRSHRMRCHPELM 232
C+ RFA L++H R H +++
Sbjct: 150 DCELRFATKQKLQNHVNRAHEKII 173
Score = 49.2 bits (112), Expect = 6e-07
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Frame = -1
Query: 600 RQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHEDTSYECFICRRVLNSRRTLRKHLL 421
R H I S P + F+ +S L+ H I E C IC R + LR H++
Sbjct: 167 RAHEKIISYSCPHESCVGHEGFEKWSQLQNH--IREAHVPSCSICGRQFKTAAHLRHHVV 224
Query: 420 VH----EDKCRHVCSY--CNKAFKRRQTLKVHMYT-HTGVKPLTCKLCDERFAYASTLRS 262
+H E++ + C C K+F R LK H+ H G C C +F Y L+
Sbjct: 225 LHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQR 284
Query: 261 HRMR 250
H R
Sbjct: 285 HLER 288
Score = 29.1 bits (62), Expect = 0.74
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Frame = -1
Query: 753 VQERKIFNCEVCNMKFXXXXXXXXXXXXXHDKI---KAYVCDL--CGYACGTNGELRQH- 592
++E + +C +C +F + K Y C + C + + L++H
Sbjct: 198 IREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHI 257
Query: 591 RAIHSDDKPFVCDKCDKTFKTYSNLKTHMD 502
IH + F CD C F L+ H++
Sbjct: 258 SVIHEGNMAFHCDSCGTKFGYKHMLQRHLE 287
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 53.6 bits (123), Expect = 3e-08
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = -1
Query: 525 SNLKTHMDIHEDTSYECFI--CRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTL 352
S+ K + +Y C C + L+ H+ H + CS C K+F R+
Sbjct: 556 SSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDK 615
Query: 351 KVHMYTHTGVKPLTCKLCDERFAYASTLRSH 259
+ H HTG+K C C++RFA L H
Sbjct: 616 RRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 48.8 bits (111), Expect = 8e-07
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 549 CDKTFKTYSNLKTHMDIHED-TSYECFICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKA 373
C+K F NLK+HM+ H + ++C IC++ + R+H +H C CN+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 372 FKRRQTLKVHMYTHTG 325
F R L H + G
Sbjct: 637 FARMDALNRHYKSEVG 652
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = -1
Query: 648 YVCDL--CGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHED-TSYE 478
YVC C L+ H H++ +PF C C K+F + + H +H ++
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFA 629
Query: 477 CFICRRVLNSRRTLRKH 427
C C + L +H
Sbjct: 630 CVTCNQRFARMDALNRH 646
Score = 32.7 bits (71), Expect = 0.060
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = -1
Query: 654 KAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTH 508
+ + C +C + + R+H +H+ K F C C++ F L H
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 48.8 bits (111), Expect = 8e-07
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = -1
Query: 498 HEDTSYECFICRRVLNSRRTLRKHL----LVHEDKCRHVCSYCNKAFKRRQTLKVHMYTH 331
H + + RR SR+ + H R+ C+ C + F R +LK+H Y+H
Sbjct: 431 HHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSH 490
Query: 330 TGVKPLTCKL--CDERFAYASTLRSHRMRCH 244
TG +P C C + F S +R H+ R H
Sbjct: 491 TGERPFVCDYAGCGKAFNVRSNMRRHQ-RIH 520
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 648 YVCDLCGYACGTNGELRQHRAIHSDDKPFVCD--KCDKTFKTYSNLKTHMDIH 496
Y C C L+ H H+ ++PFVCD C K F SN++ H IH
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 47.6 bits (108), Expect = 2e-06
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = -1
Query: 573 DKPFVC--DKCDKTFKTYSNLKTHMDIH-EDTSYECFICRRVLNSRRTLRKHLLVHEDKC 403
D +VC + C+K N+++H+ H D Y C +C+ L++HL +HE+
Sbjct: 440 DGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGR 499
Query: 402 RHVCSYCNKAFKRRQTLKVH 343
+VC C K F R L H
Sbjct: 500 PYVCE-CLKRFNRLDALNRH 518
Score = 42.3 bits (95), Expect = 7e-05
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = -1
Query: 648 YVC--DLCGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHED-TSYE 478
YVC + C + H H D+P+ CD C F + +LK H+ IHE+ Y
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYV 502
Query: 477 CFICRRVLNSRRTLRKH 427
C C + N L +H
Sbjct: 503 C-ECLKRFNRLDALNRH 518
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 402 RHVCSY--CNKAFKRRQTLKVHMYTHTGVKPLTCKLCDERFAYASTLRSHRMRCH 244
++VC Y CNK R+ ++ H+ TH +P C LC F L+ H +R H
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRH-LRIH 495
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 654 KAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTH 508
+ Y CDLC + +L++H IH + +P+VC+ C K F L H
Sbjct: 471 RPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = -1
Query: 654 KAYVCDLCGYACGTNGELRQH-RAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHEDTS 484
K++VC C + LR+H R++H+ +KPFVC C K F NL+ H +H + S
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Score = 43.6 bits (98), Expect = 3e-05
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -1
Query: 396 VCSYCNKAFKRRQTLKVHMYT-HTGVKPLTCKLCDERFAYASTLRSHRMRCH 244
VC C+K FKR + L+ H+ + HT KP C +C +RF+ LR H R H
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHE-RLH 473
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 570 KPFVCDKCDKTFKTYSNLKTHM-DIHEDTSYECFICRRVLNSRRTLRKHLLVH 415
K FVC +C K FK +L+ H+ +H IC + + R LR+H +H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHERLH 473
Score = 34.7 bits (76), Expect = 0.015
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 486 SYECFICRRVLNSRRTLRKHLL-VHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGVKP-L 313
S+ C C + LR+H+ +H + VC C K F RR L+ H H P L
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRL 480
Query: 312 TC 307
C
Sbjct: 481 AC 482
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -1
Query: 741 KIFNCEVCNMKFXXXXXXXXXXXXXHDKIKAYVCDLCGYACGTNGELRQHRAIHSDDKP 565
K F C C+ KF H K +VC +CG LRQH +H + P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 46.0 bits (104), Expect = 6e-06
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -1
Query: 450 SRRTLRKHLLVHE-DKCRHVCSY--CNKAFKRRQTLKVHMYTHTGVKPLTCKLCDERFAY 280
+ + L+K H R C+Y C K+F R++ L+ H TH VK +C C+ FA
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFAR 67
Query: 279 ASTLRSHRMRCH 244
+ L H + H
Sbjct: 68 SDVLNRHVQQMH 79
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 468 CRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHM 340
C + + LR+H HE+ CS+CN+AF R L H+
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHV 75
Score = 29.1 bits (62), Expect = 0.74
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -1
Query: 603 LRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHEDTSYECFICRRVLNSRRTLRKHL 424
LR+H H + K F C C++ F L H+ + RR+LN+ L +
Sbjct: 43 LRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ-QMHLQKQNLSERRMLNASCFLGFCV 101
Query: 423 LVHE 412
L H+
Sbjct: 102 LAHD 105
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 42.7 bits (96), Expect = 6e-05
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 393 CSYCNKAFKRRQTLKVHMYTHTGVKPLTCKL--CDERFAYASTLRSHRMRCHPELMVPDG 220
C C KAF R + H+ THTG KP C C +RF+ + L H R H
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH-ARIHTNANSRRN 86
Query: 219 RAAYPAANYNHVPVSNN 169
AA AAN N SN+
Sbjct: 87 AAAAAAAN-NSARSSNS 102
Score = 34.7 bits (76), Expect = 0.015
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 483 YECFICRRVLNSRRTLRKHLLVHEDKCRHVCSY--CNKAFKRRQTLKVHMYTHT 328
Y+C +C + +H+ H + HVC++ C K F R L H HT
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 32.7 bits (71), Expect = 0.060
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -1
Query: 663 DKIKAYVCDLCGYACGTNGELRQHRAIHSDDKPFVC--DKCDKTFKTYSNLKTHMDIHED 490
D + Y C LC A +H H+ +KP VC C K F L H IH +
Sbjct: 21 DAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Query: 489 TS 484
+
Sbjct: 81 AN 82
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 486 SYECFICRRVLNSRRTLRKHLLVHEDKCRHVCSY--CNKAFKRRQTLKVHMYTH 331
SYEC C+RV + + +H+ H + CSY C K F RR L H+ TH
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -1
Query: 393 CSYCNKAFKRRQTLKVHMYTHTGVKPLTCKL--CDERFAYASTLRSH-RMRCHPELMVPD 223
C +C + F R++ H+ +HTG KP C C +RF L H R L+ P+
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKALVTPE 65
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = -1
Query: 402 RHVCSYCNKAFKRRQTLKVHMYTHTGVKPLTCKL-------CDERFAYASTLRSHRMRCH 244
++VC C +AF R + LK H+ +HT KP TC C +F+ L H+ + H
Sbjct: 69 QYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
Score = 39.5 bits (88), Expect = 5e-04
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1
Query: 660 KIKAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCD 544
K+K YVC+ C A L++H H+++KPF C + D
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
Score = 28.7 bits (61), Expect = 0.97
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 570 KPFVCDKCDKTFKTYSNLKTHMDIHEDTSYECFICRRV 457
K +VC+ C + F +LK H+ H T+ + F C +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSH--TNEKPFTCSEI 103
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Frame = -1
Query: 483 YECFICRRVLNSRRTLRKHLLVHEDKCRHVCSY-------CNKAFKRRQTLKVH 343
Y C C R L++H+ H ++ CS C + F RR L H
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 435 RKHLLVHEDKCRHVCSY--CNKAFKRRQTLKVHMYTHTGVKPLTCKLCDERFAYASTLRS 262
+K E R+ C + C K+F R++ + H +HT K C C F + L
Sbjct: 5 KKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNR 64
Query: 261 HRMRCH 244
H + H
Sbjct: 65 HVNQKH 70
Score = 31.5 bits (68), Expect = 0.14
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -1
Query: 492 DTSYECFI--CRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHM 340
D Y+C C + + R+H H + +C +C+ +F R L H+
Sbjct: 14 DIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 30.3 bits (65), Expect = 0.32
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -1
Query: 648 YVCDL--CGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMD 502
Y CD C + R+H H++ K F+C C +F L H++
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVN 67
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 663 DKIKAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMD-IHEDT 487
D + + CD C + L +H+A HS +P C C+ K LK H+ H D
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Query: 486 S 484
S
Sbjct: 86 S 86
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -1
Query: 483 YECFICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHM 340
+ C C + L +H H C YC KR+ LK H+
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHI 78
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 34.3 bits (75), Expect = 0.020
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Frame = -1
Query: 549 CDKTFKTYSNLKTHMDIHEDTSYECFICRRVLNSRRTLRKHLLVHEDK--CR-HVCSYCN 379
C++ T NL H IH T+ R++++ ++ H+ K C C
Sbjct: 31 CEQDLLTLDNLVHH--IHNGTTSNL----RLISNINSILDHIGNRRPKYTCEWDDCPRKG 84
Query: 378 KAFKRRQTLKVHMYTHTGVKPLTCKL--CDERFAYASTLRSHRMRCH 244
R L H+ +HTG KP C + CD F + L H H
Sbjct: 85 MVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -1
Query: 594 HRAIHSDDKPFVCD--KCDKTFKTYSNLKTHM-DIHE 493
H H+ +KPF+C +CD++F L HM +HE
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHE 132
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 33.1 bits (72), Expect = 0.045
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
Frame = -1
Query: 627 YACGTNGELRQHRAIHSDDKP-----FVCDKCDKTFKT----YSNLK--THMDIHEDTSY 481
++CG G LR R I + K F CD C + + Y K H+D HE S
Sbjct: 259 HSCG--GSLRAGRIISASGKKLHPQCFKCDTCSQNLEHVGFYYREGKFYCHLDYHEQFSP 316
Query: 480 ECFICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAF 370
C C+ + + + HE+ H C+ C++ F
Sbjct: 317 RCKHCKTPIEDQAVHINNDWFHEN--HHFCAGCSEVF 351
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 29.9 bits (64), Expect = 0.42
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 594 HRAIHSDDKPFVCDKCDKTFKTYSNLKTH 508
H+ ++KP+ C+ C K +K + LK H
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYH 417
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = -1
Query: 567 PFVCDKCDKTFKTYSNLKTHMDIHEDTSYECFICRRVLNSRRTLRKHLLVHEDKCRHVCS 388
P C C +F ++ K HM S+ +I R L + C
Sbjct: 207 PRDCLFCAASFSSFDTCKKHMK----ASHSLYIPEREYLVDEPSLFDYLAEKISIGFTCL 262
Query: 387 YCNKAFKRRQTLKVHMYT--HTGV 322
CN+ FK + ++ HM HT +
Sbjct: 263 TCNREFKSLEAVRAHMQQKGHTSI 286
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -1
Query: 600 RQHRAIHSDDKPFVCDKCDKTFKTYS---NLKTHMDIHEDTSYECFICRRVLNSRRTLRK 430
R H + SD FV K KTY+ ++ I E E + RR+L+ ++R
Sbjct: 393 RVHEKLLSDKVDFVTLNLVKESKTYTKKTSVSLQKAIREYVEKEAYYERRLLSIMESIRP 452
Query: 429 HL 424
H+
Sbjct: 453 HI 454
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 284 ANRSSHSLHVKGLTPVWVYM*TFKVCLRLNALLQYEQTCRHLS 412
ANRSS S H LT + +F LR A +Q +T R +S
Sbjct: 792 ANRSSSSFHNPDLTDTEIQETSFNNDLRPVASIQSAETSRSVS 834
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 519 LKTHMDIHEDTSYECFICRRVLNSRRTL 436
LK ++ +H + EC IC VL+ RTL
Sbjct: 1544 LKKNISMHFEGVEECAICYSVLSVERTL 1571
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 657 IKAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCDK 541
+ AY CD CGY E+RQ + + P D+C K
Sbjct: 200 VNAYTCDRCGYE--VFQEIRQKTFLPMSECP--SDECKK 234
>SPAC8C9.06c |||mitochondrial translation regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 931
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 243 PELMVPDGRAAYPAANYNHVPVSNNYIKNDMAPANPVAKNE 121
P L P +PA +H S + KND A AN NE
Sbjct: 19 PLLWFPQPLKYWPAFQQSHTFNSMSVFKNDNAIANQTTVNE 59
>SPBC577.14c |spa1|spa|ornithine decarboxylase antizyme
Spa1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 226
Score = 25.8 bits (54), Expect = 6.9
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = -1
Query: 339 YTHTGVKPLTCKLC---DERFAYASTLRSHRMRCHPELMVPDGRAAYPAANYNHVP--VS 175
+TH G + T LC D+ F Y ST C L RAA+ HVP +S
Sbjct: 34 HTH-GRRRNTLALCTTKDQMFVYGSTPAGGAEWCSEALERSRPRAAFKQQRRRHVPRWIS 92
Query: 174 NNYIKNDMAPANPVAKNEVEALSGN 100
+++ P+ + + V GN
Sbjct: 93 DSFRTCLPKPSGILKEQTVNEEEGN 117
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.4 bits (53), Expect = 9.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 456 LNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRR 361
L S RTL+ L+ D + SY N A KR+
Sbjct: 384 LGSIRTLKAQKLIDLDNIKRELSYYNDATKRK 415
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 564 FVCDKCDKTFKTYSNLKTH 508
F CDKCD F S L H
Sbjct: 139 FRCDKCDMMFVKQSGLTNH 157
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,058,466
Number of Sequences: 5004
Number of extensions: 60692
Number of successful extensions: 248
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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