Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_D07
         (774 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0608 + 4515709-4515951,4516085-4516678                           43   3e-04
03_06_0316 + 33091194-33091370,33091451-33092155                       40   0.002
04_03_0041 + 10046063-10046170,10046284-10046742                       38   0.012
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505...    37   0.020
01_05_0530 + 22984672-22984821,22985444-22985676,22986659-229867...    31   1.0  
09_04_0041 - 14051870-14052430,14052509-14052562                       29   4.1  

>07_01_0608 + 4515709-4515951,4516085-4516678
          Length = 278

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 29/73 (39%), Positives = 37/73 (50%)
 Frame = -2

Query: 761 SHPKTSEMVNSXIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLI 582
           +HP  +EM+   I  LKER+GSS QAI K+I A +      L P  RK L   ++  T  
Sbjct: 75  AHPPYAEMIMEAIVALKERTGSSSQAIGKHIHANH---GANLPPNFRKLLSGNLKKLTAA 131

Query: 581 QTKGKGASGSFKL 543
               K    SFKL
Sbjct: 132 GKLAK-VKNSFKL 143


>03_06_0316 + 33091194-33091370,33091451-33092155
          Length = 293

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
 Frame = -2

Query: 773 KAKPSHPKTSEMVNSXIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYL----KN 606
           ++  +HP  +EM++  IA LKER+GSS  AI K++  ++K   + L    RK L    K 
Sbjct: 49  RSTATHPPYAEMISEAIATLKERTGSSQYAIGKFLEDKHK---DHLPSNFRKQLLVQIKK 105

Query: 605 AVESGTLIQTK 573
            V +G L + K
Sbjct: 106 LVAAGKLTKVK 116


>04_03_0041 + 10046063-10046170,10046284-10046742
          Length = 188

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -2

Query: 761 SHPKTSEMVNSXIAELKERSGSSLQAIKKYIAAQYKVD-AEKLAPFIRKYLKNAVESGTL 585
           SHP   EM+   I  LKER+GSS  AI KY+  ++           +   L+     G L
Sbjct: 30  SHPPYFEMIKEAITVLKERTGSSAHAIAKYMEEKHGASLPANYKKMLSIQLRGFASKGKL 89

Query: 584 IQTK 573
           ++ K
Sbjct: 90  VKVK 93


>08_02_0743 -
           20647440-20647927,20647997-20648426,20650127-20650570,
           20650639-20650692
          Length = 471

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 23/64 (35%), Positives = 31/64 (48%)
 Frame = -2

Query: 764 PSHPKTSEMVNSXIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTL 585
           P  P   EM+ + I  L E+SGS+  AI K+I  +Y       A  +  +L    ESG L
Sbjct: 11  PPLPPYPEMILAAIEGLNEKSGSNKSAISKFIEGKYGDLPPAHASLLTAHLARMKESGEL 70

Query: 584 IQTK 573
           I  K
Sbjct: 71  IFLK 74


>01_05_0530 +
           22984672-22984821,22985444-22985676,22986659-22986743,
           22986953-22987036,22987114-22987455
          Length = 297

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 752 KTSEMVNSXIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTK 573
           +  +++   I +LKE SGS+   I  YI  QY    E     +   LK  V +G LI+  
Sbjct: 128 RLDDLILEAIKKLKEPSGSNRTTISSYIEEQY-WPPEDFQRLLSTKLKALVATGKLIKVN 186

Query: 572 GK 567
            K
Sbjct: 187 QK 188


>09_04_0041 - 14051870-14052430,14052509-14052562
          Length = 204

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -2

Query: 770 AKPSHPKTSEMVNSXIAELKERSGSSLQAIKKYIAAQYK 654
           A PS+P   EM+ + I  L +R+GS+  AI ++I  +Y+
Sbjct: 12  ATPSYP---EMILAAIEALDDRNGSNKTAISQHIEGKYE 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,657,659
Number of Sequences: 37544
Number of extensions: 169185
Number of successful extensions: 405
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)