Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_D05
         (339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   0.45 
AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    24   1.8  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    21   9.6  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    21   9.6  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 10/66 (15%)
 Frame = +3

Query: 96  RMSMRSMQPENMQSTQSTPGVRCT----------QQRPEQYMQQLQGTCSSPAEAWLTRK 245
           R S R  QP+  Q  Q   G R            QQRP Q  QQ Q       E ++  +
Sbjct: 242 RPSQRHRQPQQQQQQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQ 301

Query: 246 PGEQRR 263
             +QR+
Sbjct: 302 LRQQRQ 307



 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 93  MRMSMRSMQPENMQSTQSTPGVRCTQQRPEQYMQQ 197
           +R   +  QP+  Q  Q     R  QQRP+Q   Q
Sbjct: 456 LRQQRQQQQPQQQQQ-QRPQQQRPQQQRPQQQRSQ 489


>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 267 LIFVALLAFASAKP 226
           ++FVALL FA  KP
Sbjct: 6   IVFVALLTFAGVKP 19


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 102 SMRSMQPENMQSTQSTPGVRCTQ 170
           S+ S  P N Q+T S+P    +Q
Sbjct: 16  SIASCYPNNSQNTNSSPNTAGSQ 38


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +3

Query: 84  NMVMRMSMRSMQPENMQSTQSTPGVRCTQQRPEQYMQQLQ 203
           N ++   +   QP        TP  R +  +P+Q  QQ Q
Sbjct: 161 NSLLAAKVAGGQPSASSRQPPTPLPRRSSAQPQQQQQQQQ 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,292
Number of Sequences: 2352
Number of extensions: 2790
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)