Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_D03
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86978-1|BAA13214.1| 2013|Homo sapiens KIAA0225 protein.               30   9.6  
BC146784-1|AAI46785.1| 2012|Homo sapiens nucleoporin 205kDa prot...    30   9.6  
BC094868-1|AAH94868.1|  335|Homo sapiens NUP205 protein protein.       30   9.6  
BC073947-1|AAH73947.1|  435|Homo sapiens NUP205 protein protein.       30   9.6  
BC063612-1|AAH63612.1|  617|Homo sapiens NUP205 protein protein.       30   9.6  
BC044255-1|AAH44255.1|  832|Homo sapiens NUP205 protein protein.       30   9.6  

>D86978-1|BAA13214.1| 2013|Homo sapiens KIAA0225 protein.
          Length = 2013

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = +3

Query: 216  IFTAQEYS*YHR-LI*INNNKLKIMTQEMFILET-------KIEYQILHSKYTPININIY 371
            I TAQ+Y    R L+ + NN+ K+++   FI+ET        +EY +LH   T    +++
Sbjct: 1867 ISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDSQDSLF 1926

Query: 372  VLPTLIK 392
               TL K
Sbjct: 1927 ASRTLFK 1933


>BC146784-1|AAI46785.1| 2012|Homo sapiens nucleoporin 205kDa protein.
          Length = 2012

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = +3

Query: 216  IFTAQEYS*YHR-LI*INNNKLKIMTQEMFILET-------KIEYQILHSKYTPININIY 371
            I TAQ+Y    R L+ + NN+ K+++   FI+ET        +EY +LH   T    +++
Sbjct: 1866 ISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDSQDSLF 1925

Query: 372  VLPTLIK 392
               TL K
Sbjct: 1926 ASRTLFK 1932


>BC094868-1|AAH94868.1|  335|Homo sapiens NUP205 protein protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = +3

Query: 216 IFTAQEYS*YHR-LI*INNNKLKIMTQEMFILET-------KIEYQILHSKYTPININIY 371
           I TAQ+Y    R L+ + NN+ K+++   FI+ET        +EY +LH   T    +++
Sbjct: 189 ISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDSQDSLF 248

Query: 372 VLPTLIK 392
              TL K
Sbjct: 249 ASRTLFK 255


>BC073947-1|AAH73947.1|  435|Homo sapiens NUP205 protein protein.
          Length = 435

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = +3

Query: 216 IFTAQEYS*YHR-LI*INNNKLKIMTQEMFILET-------KIEYQILHSKYTPININIY 371
           I TAQ+Y    R L+ + NN+ K+++   FI+ET        +EY +LH   T    +++
Sbjct: 289 ISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDSQDSLF 348

Query: 372 VLPTLIK 392
              TL K
Sbjct: 349 ASRTLFK 355


>BC063612-1|AAH63612.1|  617|Homo sapiens NUP205 protein protein.
          Length = 617

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = +3

Query: 216 IFTAQEYS*YHR-LI*INNNKLKIMTQEMFILET-------KIEYQILHSKYTPININIY 371
           I TAQ+Y    R L+ + NN+ K+++   FI+ET        +EY +LH   T    +++
Sbjct: 471 ISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDSQDSLF 530

Query: 372 VLPTLIK 392
              TL K
Sbjct: 531 ASRTLFK 537


>BC044255-1|AAH44255.1|  832|Homo sapiens NUP205 protein protein.
          Length = 832

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
 Frame = +3

Query: 216 IFTAQEYS*YHR-LI*INNNKLKIMTQEMFILET-------KIEYQILHSKYTPININIY 371
           I TAQ+Y    R L+ + NN+ K+++   FI+ET        +EY +LH   T    +++
Sbjct: 686 ISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDSQDSLF 745

Query: 372 VLPTLIK 392
              TL K
Sbjct: 746 ASRTLFK 752


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,028,275
Number of Sequences: 237096
Number of extensions: 1623602
Number of successful extensions: 5895
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5889
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)