Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_D03
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    27   0.18 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    27   0.18 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   2.2  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   2.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   8.9  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 464 VCTFVCDLSQNEIYLTLRKRLEILFNESW*HVN 366
           VC+  C L  N+I LT+R  LE+ F     H+N
Sbjct: 241 VCSGNCKL--NDILLTVRPHLELTFENILSHIN 271


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 464 VCTFVCDLSQNEIYLTLRKRLEILFNESW*HVN 366
           VC+  C L  N+I LT+R  LE+ F     H+N
Sbjct: 241 VCSGNCKL--NDILLTVRPHLELTFENILSHIN 271


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 261 INNNKLKIMTQEMFILETKIEYQI 332
           + + KLKI+    FIL+ +++Y+I
Sbjct: 44  VMDTKLKIIEILQFILDVRLDYRI 67


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 261 INNNKLKIMTQEMFILETKIEYQI 332
           + + KLKI+    FIL+ +++Y+I
Sbjct: 12  VMDTKLKIIEILQFILDVRLDYRI 35


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = +3

Query: 273 KLKIMTQEMFILETKIEYQILHSKYTPI 356
           KL++ T+E+F  + K +  ++  + TP+
Sbjct: 506 KLRLETKELFSSQQKTKNNLMKLETTPV 533


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/45 (22%), Positives = 18/45 (40%)
 Frame = -3

Query: 692 DIPIXGPKCDLNAFFARRLIVSSNYFKDCTFIIQFLRKGLNELFC 558
           D+ + GP      + +  L +  +    C F    +  GL+  FC
Sbjct: 350 DVAVSGPGLAFLVYPSAVLELPGSSIWSCLFFFMLILIGLDSQFC 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,287
Number of Sequences: 438
Number of extensions: 4029
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)