Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_D02
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.28 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.86 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 295 TTIFMFSLIYLIRNLQLKYNILKILSLDGFNENVLSSCL 179
           TT+  FS I  +R +   +NI  I     FNEN + S L
Sbjct: 397 TTMSTFSDITFMRTVWKFFNIFLITPFYNFNENTIHSKL 435


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 23  FCTILYFRPNYILYKL*LYYVFCFLVI 103
           FC        ++L+ L +YY +C L+I
Sbjct: 268 FCCAFIIFTMHLLFLLCIYYFYCALII 294



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +1

Query: 373 IYYFLYSGTKVALFMNIVACITMSSSHFLFYPVCIILCSWTSLC 504
           IYYF        + +  + C    + H LFY   II      LC
Sbjct: 56  IYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLC 99


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 524 LRSTTTLHSDVHEQRIIHTG*KRKCEDDMV 435
           + ST+ L +D+  +RII    + +C D +V
Sbjct: 171 VESTSNLQADMPLERIIEAEKRVECNDPLV 200


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 480 DNTYRIEEKM*GRHGDTSHNIH 415
           DN+   E+K   +HGD +H  H
Sbjct: 256 DNSNSSEKKSSIQHGDDAHKTH 277


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 168 YCIQRQLLNTFSLNPSNDNIFKILY 242
           YCIQ        +NP+  ++ K+LY
Sbjct: 337 YCIQPPCGQLNPINPNVFDVLKLLY 361


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 204 LNPSNDNIFKIL 239
           LNP N N+++IL
Sbjct: 369 LNPDNPNVYEIL 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,240
Number of Sequences: 336
Number of extensions: 3711
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)