Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_C12
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.3  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   3.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   6.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   6.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 96  LYIQLYKRIINLFRALDRGLDV 161
           ++ QLYK+++NL++   + L V
Sbjct: 433 VFYQLYKKVMNLYQQYQQSLPV 454


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 360 HCPEQLIVIPFTNIPNRYRVITMLYEDSDLEYRKSSESKPRCSS 491
           H P    V+ +     +  +I+  ++DSD EY  +S+  PR +S
Sbjct: 54  HDPGLAAVLQYLIRSGQLNIISSDHDDSDEEYAANSQ-PPRITS 96


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 363 CPEQLIVIPFTNIPNRYRVITMLYEDSDLE 452
           C E+ I+  F  IPNRYR    +Y+  +++
Sbjct: 770 CEERGIL--FMPIPNRYREAKQIYKVGNVQ 797


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 485 FVPECTHRPSGAPARCNSLVISSSPN 562
           F P   + P    A C+S ++S+SP+
Sbjct: 63  FSPSGPNSPGSFTAGCHSNLLSTSPS 88



 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 334 CQYCSAERCL 305
           CQYC  ++CL
Sbjct: 162 CQYCRYQKCL 171


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 485 FVPECTHRPSGAPARCNSLVISSSPN 562
           F P   + P    A C+S ++S+SP+
Sbjct: 63  FSPSGPNSPGSFTAGCHSNLLSTSPS 88



 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 334 CQYCSAERCL 305
           CQYC  ++CL
Sbjct: 162 CQYCRYQKCL 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,318
Number of Sequences: 438
Number of extensions: 3359
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)