Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_C11
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 318 3e-87
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 318 3e-87
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 318 3e-87
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 318 3e-87
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 318 3e-87
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 318 3e-87
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 317 6e-87
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 317 6e-87
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 317 6e-87
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 311 4e-85
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 300 6e-82
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 155 4e-38
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 135 3e-32
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 8e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 4e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 75 4e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.64
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.64
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.64
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 29 3.4
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.5
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 28 5.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 7.9
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 7.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 7.9
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 318 bits (780), Expect = 3e-87
Identities = 148/154 (96%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNS
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNS 282
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 318 bits (780), Expect = 3e-87
Identities = 148/154 (96%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNS
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNS 282
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 318 bits (780), Expect = 3e-87
Identities = 148/154 (96%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNS
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNS 282
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 318 bits (780), Expect = 3e-87
Identities = 148/154 (96%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNS
Sbjct: 179 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNS 238
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 239 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 298
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 299 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 318 bits (780), Expect = 3e-87
Identities = 148/154 (96%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNS
Sbjct: 209 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNS 268
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 269 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 328
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 329 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 318 bits (780), Expect = 3e-87
Identities = 148/154 (96%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNS
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNS 282
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 317 bits (778), Expect = 6e-87
Identities = 147/154 (95%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNS
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNS 282
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 317 bits (778), Expect = 6e-87
Identities = 147/154 (95%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNS
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNS 282
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 317 bits (778), Expect = 6e-87
Identities = 147/154 (95%), Positives = 152/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNS
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNS 282
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 311 bits (763), Expect = 4e-85
Identities = 146/154 (94%), Positives = 151/154 (98%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFEQEMAT ASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNS
Sbjct: 223 DFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNS 282
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWI 341
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 300 bits (737), Expect = 6e-82
Identities = 140/154 (90%), Positives = 145/154 (94%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
DFE E+A ASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY S
Sbjct: 222 DFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQS 281
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 368
IMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWI
Sbjct: 282 IMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWI 341
Query: 367 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 266
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 155 bits (375), Expect = 4e-38
Identities = 71/147 (48%), Positives = 98/147 (66%)
Frame = -3
Query: 706 TXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVD 527
T ++S++ SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD
Sbjct: 228 TKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVD 287
Query: 526 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 347
+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+AS
Sbjct: 288 LRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVAS 347
Query: 346 LSTFQQMWISKQEYDESGPSIVHRKCF 266
L TF++MW+ K+EY++ G S +H++ F
Sbjct: 348 LDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 135 bits (327), Expect = 3e-32
Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 13/158 (8%)
Frame = -3
Query: 727 DFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNS 548
D EQE ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+ E +
Sbjct: 226 DVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGC 285
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKII 401
I D+D R D Y + VLSGGTTMYPG+ R++KE+ L A KI+I
Sbjct: 286 IQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIE 345
Query: 400 APPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 293
APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 346 APPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (290), Expect = 8e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -3
Query: 673 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 509
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 508 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 338
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 337 FQQMWISKQEYDESGPSIVHRKC 269
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99.1 bits (236), Expect = 3e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -3
Query: 643 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 464
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 463 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 308
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 4e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -3
Query: 649 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 473
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 472 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 341
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 340 TFQQMWISKQEYDESGPSI 284
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -3
Query: 649 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 470
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 469 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 299
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 298 SGPSIVHRKCF*T 260
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -3
Query: 649 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 470
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 469 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 299
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 298 SGPSIVHRKCF*T 260
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 547 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 383
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 382 ----YSVWIGGSILASL-STFQQMWISKQEY 305
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 371 PYGVLPLWRSNDLNLHCRWGESCD 442
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 371 PYGVLPLWRSNDLNLHCRWGESCD 442
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 371 PYGVLPLWRSNDLNLHCRWGESCD 442
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 683 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 564
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 683 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 564
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 641 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 528
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 641 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 528
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 641 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 528
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 641 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 528
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 641 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 528
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 723 SSRKWPPX--HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSN 601
SSR PP PAA RSL P R SL T +V+ R +N
Sbjct: 19 SSRLSPPSPASPAATRRSLPTSPISRRSLPSTPRTVSPRRLNN 61
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 207 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 299
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 310 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 209
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 207 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 299
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 391 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 230
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,911,528
Number of Sequences: 27780
Number of extensions: 360334
Number of successful extensions: 1075
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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