Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_C06
         (325 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   2.2  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    22   5.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    22   6.6  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    21   8.8  

>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 252 RRQNNITCCNVIIDKIIEYLF 314
           RR   ++ CN+ +  I++YLF
Sbjct: 108 RRVQYVSYCNIGLPAIVDYLF 128


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 107 PLQSKLHFYFEEK*SNHLCYKD 42
           P   K+H  F  K  NHL  KD
Sbjct: 136 PGTKKVHVIFSYKGKNHLINKD 157


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 3   VNLLAKKKHQGLPIFVTKMIT 65
           +NL   +KH  +  F+T+++T
Sbjct: 897 INLWVSRKHGEVDFFLTQLLT 917


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 23  ETSRSTYLCNKDDYFIF 73
           E SR + L +KDD ++F
Sbjct: 264 ENSRMSKLSSKDDEYVF 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,873
Number of Sequences: 2352
Number of extensions: 5712
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)