Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_C06
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   3.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   3.7  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   4.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   6.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   6.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    20   8.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    20   8.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   8.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    20   8.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   8.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 274 HVILFCRRKLSVLSNII 224
           HV L+ ++ L+VL NI+
Sbjct: 349 HVKLYTKQGLNVLGNIV 365


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 274 HVILFCRRKLSVLSNII 224
           HV L+ ++ L+VL NI+
Sbjct: 349 HVKLYTKQGLNVLGNIV 365


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -1

Query: 292 SIITLQHVILFCRRKLSVLSNIIFPLNYLKIRWL 191
           S+I     +LF  + + + +N+   LN   + WL
Sbjct: 7   SVIASDMAVLFPEKIIGLHNNMCTSLNLSNLFWL 40


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 26  TSRSTYLCNKDDYF 67
           +SR  Y C++ DYF
Sbjct: 111 SSRMEYECSRIDYF 124


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 9   LLAKKKHQGLPIFVTK 56
           +LAKK+ +G+P ++ K
Sbjct: 249 ILAKKEIKGVPTYLIK 264


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 253 RKLSVLSNIIFPLNYLKIRWLQYIH 179
           + + V++ I FP+ Y       +IH
Sbjct: 460 KTIDVIARITFPVAYFMFLTFFFIH 484


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 253 RKLSVLSNIIFPLNYLKIRWLQYIH 179
           + + V++ I FP+ Y       +IH
Sbjct: 446 KTIDVIARITFPVAYFMFLTFFFIH 470


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 253 RKLSVLSNIIFPLNYLKIRWLQYIH 179
           + + V++ I FP+ Y       +IH
Sbjct: 480 KTIDVIARITFPVAYFMFLTFFFIH 504


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 253 RKLSVLSNIIFPLNYLKIRWLQYIH 179
           + + V++ I FP+ Y       +IH
Sbjct: 429 KTIDVIARITFPVAYFMFLTFFFIH 453


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 4/7 (57%), Positives = 6/7 (85%)
 Frame = +3

Query: 135 IHHWAWN 155
           +HHW W+
Sbjct: 207 LHHWHWH 213


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,130
Number of Sequences: 438
Number of extensions: 1980
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)