Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_C02
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0097 + 15166077-15166349,15166623-15166694,15166715-151671...    32   0.60 
03_05_0298 - 22873933-22874040,22874807-22875407,22875517-228755...    30   2.4  
08_01_0016 - 109152-109214,109296-109385,109853-109954,110046-11...    28   9.8  

>02_03_0097 +
           15166077-15166349,15166623-15166694,15166715-15167161,
           15167579-15167794,15167873-15168213,15168329-15168947
          Length = 655

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -1

Query: 199 YSIEMGHRDWLSANCHCIATTMH 131
           YS+ +G RDW+ ANC CI +TMH
Sbjct: 412 YSLLLG-RDWIHANC-CIPSTMH 432


>03_05_0298 -
           22873933-22874040,22874807-22875407,22875517-22875596,
           22875685-22875816
          Length = 306

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 642 ECPSSQTTSMLGHLXCXQVNMGSVV---AARIGHSSKAARPVR 761
           E   S T+  LGHL C  V+    +    +R  H++ A+RP R
Sbjct: 101 EADGSDTSLPLGHLQCSDVSFSLAIPRRQSRRAHATSASRPTR 143


>08_01_0016 -
           109152-109214,109296-109385,109853-109954,110046-110213,
           110510-110530,110836-110896,110987-111099,112125-112202,
           112294-112434,112532-112696,112776-112868,113096-113162,
           113285-113388,113896-114041,114303-114579
          Length = 562

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 90  LQIVIFYSSLYENVKFEGKYNFL 22
           L+I   +S LY N K  GKYN L
Sbjct: 246 LEIARLFSRLYSNPKTRGKYNLL 268


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,056,050
Number of Sequences: 37544
Number of extensions: 376077
Number of successful extensions: 744
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)