Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_C01
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28991-4|AAK68310.1| 227|Caenorhabditis elegans Hypothetical pr... 251 4e-67
AF068709-13|AAO26012.1| 321|Caenorhabditis elegans Serpentine r... 31 1.0
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 29 4.2
U80026-3|AAC25845.2| 354|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 29 4.2
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 29 4.2
AF000198-5|AAB53053.1| 381|Caenorhabditis elegans Hypothetical ... 29 5.5
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 9.7
AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans Na/Ca,K-excha... 28 9.7
>U28991-4|AAK68310.1| 227|Caenorhabditis elegans Hypothetical
protein F08F8.7 protein.
Length = 227
Score = 251 bits (615), Expect = 4e-67
Identities = 124/221 (56%), Positives = 155/221 (70%), Gaps = 4/221 (1%)
Frame = -1
Query: 727 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI- 551
L+ + PSILNADL+ L E +KLL GAD+LHLDVMDG FVPNLTFGHPVV+ LR +
Sbjct: 3 LRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVESLRKSLG 62
Query: 550 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKD---VIEVCRKVREHGMKVGVAI 380
+ FF+ H+MV P QW+ PMA AG +Q+TFH E V V E+ K+R+ GMKVG+++
Sbjct: 63 AEPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGLSV 122
Query: 379 KPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVG 200
KPGT V + K+ + D LIMTVEPGFGGQKFMEN M KV+ +R YP L I+VDGGV
Sbjct: 123 KPGTSVEHILKHANHLDNALIMTVEPGFGGQKFMENMMEKVRTIRSKYPNLTIQVDGGVT 182
Query: 199 PSTINCCANAGANMIVSGTAIIGSADQAATIKLLRSTVQDA 77
P I A AGAN IVSGT II +ADQ+ + +R+ V+ A
Sbjct: 183 PENIEISAQAGANAIVSGTGIIKAADQSVAMTTIRNAVEAA 223
>AF068709-13|AAO26012.1| 321|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 56 protein.
Length = 321
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 294 PNPGSTVIIKTMSDIEIYFSTSE-TGVPGFIATPTFIPCSLTFLH 425
P+P + II +M +EI FS TG F P+FI S+ FLH
Sbjct: 5 PSPPAP-IITSMETVEIEFSAKVFTGFQLFYGVPSFIIMSVLFLH 48
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = -1
Query: 211 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQD 80
G GP T++CC+ AG + +II D T+KLLR+ Q+
Sbjct: 1391 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQN 1441
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = -1
Query: 211 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQD 80
G GP T++CC+ AG + +II D T+KLLR+ Q+
Sbjct: 2104 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQN 2154
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical protein
C09D8.1c protein.
Length = 1216
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = -1
Query: 211 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQD 80
G GP T++CC+ AG + +II D T+KLLR+ Q+
Sbjct: 1140 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQN 1190
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = -1
Query: 211 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQD 80
G GP T++CC+ AG + +II D T+KLLR+ Q+
Sbjct: 1391 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQN 1441
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = -1
Query: 211 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQD 80
G GP T++CC+ AG + +II D T+KLLR+ Q+
Sbjct: 2104 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQN 2154
>U80026-3|AAC25845.2| 354|Caenorhabditis elegans Hypothetical
protein EGAP9.3 protein.
Length = 354
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 277 ENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAGANMIVSGTAIIGSADQA--ATIK 104
+N++ K +YL +P+ I DGG+G + G M ++ TAI S D + +
Sbjct: 51 KNEIDKQKYLL--FPMTAIVFDGGLGNQLFEVFSLLGLAMKLNRTAIFNSDDWILHSKLD 108
Query: 103 LLRSTVQDANKQII 62
LL+ V +II
Sbjct: 109 LLQEQVPQVAARII 122
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = -1
Query: 211 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQD 80
G GP T++CC+ AG + +II D T+KLLR+ Q+
Sbjct: 1411 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQN 1461
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = -1
Query: 211 GGVGPSTINCCANAGANMIVSGTAII-------GSADQAATIKLLRSTVQD 80
G GP T++CC+ AG + +II D T+KLLR+ Q+
Sbjct: 2124 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVKLLRTERQN 2174
>AF000198-5|AAB53053.1| 381|Caenorhabditis elegans Hypothetical
protein T28F2.1 protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 238 YPLLDIEVDGGVGPSTINCCANAGANMIVSGTAIIGSADQA--ATIKLLRSTVQDANKQI 65
+P++ I DGG+G + G + ++ TAI S D + + LLR V +++
Sbjct: 63 FPMVTIVFDGGLGNQLFEVFSLLGLALKLNRTAIFNSEDWILHSKLNLLREQVPQVAERV 122
Query: 64 I 62
I
Sbjct: 123 I 123
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 123 SADPIMAVPETIMLAPALAQQFIVDGPTPPSTSISSNG*FSLKYCTLAI*FS 278
++ I ++PETI P+L ++ D P +S S N LK L FS
Sbjct: 488 TSSAITSIPETITKLPSLTHLYLSDNPLDQLSSTSLNHLDGLKKIRLGGNFS 539
>Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical
protein F35C12.2a protein.
Length = 596
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 39 LAGVVAYSIICLXASCTVLRSNFIVAAWSADPIMAVPETIMLAPALAQQFIVD 197
+ G ++I+C+ A CT+ + + W P+ MLA A+ F +D
Sbjct: 175 IVGSATFNILCVLAFCTLFSKSILDLTWW--PLFRDVSIYMLALAMLVFFFMD 225
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = -1
Query: 481 AGVNQYTFHIEPVKDVIEVCRKVRE 407
+ +NQ+T + P+KD+++V R V++
Sbjct: 249 SALNQFTITMVPIKDMVDVLRVVKD 273
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = -1
Query: 481 AGVNQYTFHIEPVKDVIEVCRKVRE 407
+ +NQ+T + P+KD+++V R V++
Sbjct: 249 SALNQFTITMVPIKDMVDVLRVVKD 273
>AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans
Na/Ca,K-exchanger protein.
Length = 596
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 39 LAGVVAYSIICLXASCTVLRSNFIVAAWSADPIMAVPETIMLAPALAQQFIVD 197
+ G ++I+C+ A CT+ + + W P+ MLA A+ F +D
Sbjct: 175 IVGSATFNILCVLAFCTLFSKSILDLTWW--PLFRDVSIYMLALAMLVFFFMD 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,225,466
Number of Sequences: 27780
Number of extensions: 358701
Number of successful extensions: 849
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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