Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_B22
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 268 2e-72
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 268 2e-72
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 268 2e-72
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 268 2e-72
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 268 2e-72
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 268 2e-72
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 268 3e-72
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 268 3e-72
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 268 3e-72
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 262 2e-70
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 256 8e-69
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 138 3e-33
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 118 4e-27
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 113 1e-25
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 100 2e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 2e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 3e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 3e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.54
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.54
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.54
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.7
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.7
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 268 bits (658), Expect = 2e-72
Identities = 123/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 268 bits (658), Expect = 2e-72
Identities = 123/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 268 bits (658), Expect = 2e-72
Identities = 123/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 268 bits (658), Expect = 2e-72
Identities = 123/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 202 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 261
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 262 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 321
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 322 SGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 268 bits (658), Expect = 2e-72
Identities = 123/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 232 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 291
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 292 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 351
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 352 SGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 268 bits (658), Expect = 2e-72
Identities = 123/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 268 bits (656), Expect = 3e-72
Identities = 122/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 268 bits (656), Expect = 3e-72
Identities = 122/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 268 bits (656), Expect = 3e-72
Identities = 122/131 (93%), Positives = 128/131 (97%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 262 bits (641), Expect = 2e-70
Identities = 121/131 (92%), Positives = 127/131 (96%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI++GNERF CPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLY NTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
MYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 256 bits (628), Expect = 8e-69
Identities = 118/131 (90%), Positives = 123/131 (93%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
GQVI+IGNERF CPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLY NTVLSGGT+
Sbjct: 245 GQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTS 304
Query: 477 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 305 MFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 297 SGPSIVHRKCF 265
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 138 bits (334), Expect = 3e-33
Identities = 63/128 (49%), Positives = 85/128 (66%)
Frame = -2
Query: 648 ISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTTMYP 469
I I N F PE LF+P +G E G+ SIMKCDVD+R+ LY N VLSGGTT++
Sbjct: 247 IEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFK 306
Query: 468 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 289
G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G
Sbjct: 307 GFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGA 366
Query: 288 SIVHRKCF 265
S +H++ F
Sbjct: 367 SAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 118 bits (284), Expect = 4e-27
Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 13/135 (9%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTT 478
G+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSGGTT
Sbjct: 249 GRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTT 308
Query: 477 MYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--ST 337
MYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 309 MYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDR 368
Query: 336 FQQMWISKQEYDESG 292
Q W+SK+EY+E G
Sbjct: 369 DQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 113 bits (272), Expect = 1e-25
Identities = 58/138 (42%), Positives = 76/138 (55%), Gaps = 8/138 (5%)
Frame = -2
Query: 657 GQVISIGNERFXCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLYXNTVL 493
G G ER PE LF +L E + + S D+DIR L+ N +
Sbjct: 298 GYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTV 357
Query: 492 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMW 322
+GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW
Sbjct: 358 TGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMW 417
Query: 321 ISKQEYDESGPSIVHRKC 268
+SK EYDESG SIV +KC
Sbjct: 418 VSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99.5 bits (237), Expect = 2e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -2
Query: 642 IGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTTMYPGI 463
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 462 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 307
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 92.7 bits (220), Expect = 2e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -2
Query: 648 ISIGNERFXCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTTMY 472
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 471 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 340
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 339 TFQQMWISKQEYDESGPSI 283
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -2
Query: 648 ISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTTMYP 469
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 468 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 297 SGPSIVHRKCF*T 259
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = -2
Query: 648 ISIGNERFXCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYXNTVLSGGTTMYP 469
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 468 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 298
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 297 SGPSIVHRKCF*T 259
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 546 IMKCDVDIRKDLYXNTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 382
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 381 ----YSVWIGGSILASL-STFQQMWISKQEY 304
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 370 PYGVLPLWRSNDLNLHCRWGESCD 441
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 370 PYGVLPLWRSNDLNLHCRWGESCD 441
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 370 PYGVLPLWRSNDLNLHCRWGESCD 441
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 640 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 527
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 640 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 527
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 640 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 527
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 640 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 527
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 640 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 527
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 206 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 298
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 309 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 208
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 206 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 298
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 390 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 229
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,741,058
Number of Sequences: 27780
Number of extensions: 303554
Number of successful extensions: 843
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -