Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_B21
(708 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 239 4e-64
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 236 2e-63
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 190 1e-49
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 123 2e-29
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 113 2e-26
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.006
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.070
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.12
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.16
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 30 0.28
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.28
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.28
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.28
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 29 0.49
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 29 0.49
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.65
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.65
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.86
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.5
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.0
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.0
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 27 2.0
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 27 2.0
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 27 2.6
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 2.6
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 27 2.6
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.6
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 3.5
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 3.5
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 3.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 3.5
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.6
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 4.6
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.6
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 4.6
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 4.6
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 26 6.1
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 6.1
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 6.1
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 6.1
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 6.1
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 6.1
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 8.0
SPCC757.08 |||exosome subunit Rrp45 |Schizosaccharomyces pombe|c... 25 8.0
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 8.0
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 25 8.0
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 8.0
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 8.0
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 8.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 239 bits (584), Expect = 4e-64
Identities = 112/169 (66%), Positives = 136/169 (80%)
Frame = -2
Query: 677 EGELAMTKDNNLLGKFELTGIPPAPRGVPQIEVTXDIDANGIXNVSAIEKSTNKENKITI 498
EGE A TKD NLLGKFEL+GIPPAPRGVPQIEVT D+DANGI NVSA+EK T K KITI
Sbjct: 442 EGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITI 501
Query: 497 TNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 318
TNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 502 TNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVD 561
Query: 317 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 171
SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 562 ASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 236 bits (578), Expect = 2e-63
Identities = 111/169 (65%), Positives = 136/169 (80%)
Frame = -2
Query: 677 EGELAMTKDNNLLGKFELTGIPPAPRGVPQIEVTXDIDANGIXNVSAIEKSTNKENKITI 498
EGE A TKD NLLGKFEL+GIPPAPRGVPQIEVT D+DANGI NVSA+EK T K KITI
Sbjct: 442 EGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITI 501
Query: 497 TNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 318
TNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 502 TNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVD 561
Query: 317 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 171
SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 562 ASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 190 bits (464), Expect = 1e-49
Identities = 91/171 (53%), Positives = 124/171 (72%), Gaps = 3/171 (1%)
Frame = -2
Query: 677 EGELAMTKDNNLLGKFELTGIPPAPRGVPQIEVTXDIDANGIXNVSAIEKS-TNKENKIT 501
EGE +TKDNNLLGKF+L GIPPAPRGVPQIEVT ++DANG+ VSA++KS K K+
Sbjct: 471 EGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLV 530
Query: 500 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-EDEKLKEK 324
I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +DE+L K
Sbjct: 531 IKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGK 590
Query: 323 ISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKMY 174
+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 591 VDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 123 bits (297), Expect = 2e-29
Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Frame = -2
Query: 677 EGELAMTKDNNLLGKFELTGIPPAPRGVPQIEVTXDIDANGIXNVSAIEKSTNKENKITI 498
+GE + +DN L+G F+LTGI PAP+G PQIEV+ D+DA+GI NVSA +K+TNK++ IT+
Sbjct: 485 QGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITV 544
Query: 497 TNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME--DEKLKEK 324
G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++ +KL ++
Sbjct: 545 AGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQ 603
Query: 323 ISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 171
+ + I D K ++ E+ + K E++ + + +Y+
Sbjct: 604 AVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 113 bits (272), Expect = 2e-26
Identities = 54/144 (37%), Positives = 89/144 (61%), Gaps = 3/144 (2%)
Frame = -2
Query: 677 EGELAMTKDNNLLGKFELTGIPPAPRGVPQIEVTXDIDANGIXNVSAIEKSTNKENKITI 498
+GE +N LG+F+LTGIPP PRG ++E T ++DANGI V+A+EK+T + I I
Sbjct: 447 QGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEI 506
Query: 497 TNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 318
TN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + + K+
Sbjct: 507 TNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLK 566
Query: 317 DSDKQTI---LDKCNDTIKWLDSN 255
DK I L +C ++ D+N
Sbjct: 567 RGDKSKIEAQLAECMSQLELEDTN 590
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.9 bits (79), Expect = 0.006
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Frame = -2
Query: 530 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 354
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 353 TMED--EKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGIYNPI 189
++D + S + +L K D WL + + K Y K ++L + PI
Sbjct: 593 KLDDIYAPFTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.070
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -2
Query: 470 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 291
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 290 K 288
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.12
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -2
Query: 488 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 309
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 308 KQTILDKCNDTIK 270
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.16
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = -2
Query: 521 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 342
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 341 EKLKEKISD 315
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 30.3 bits (65), Expect = 0.28
Identities = 29/112 (25%), Positives = 48/112 (42%)
Frame = -2
Query: 542 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 363
S+I+K K T+ + + E+ + E EK + +A+ A
Sbjct: 206 SSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQ 265
Query: 362 MKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 207
+ +E EK KEK D D++ DT+ D NQ+ +E E QKE++
Sbjct: 266 NSAKLEKEKAKEKQKDKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.3 bits (65), Expect = 0.28
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = -2
Query: 545 VSAIEKSTNKENKITITNDKGRLSKEEI--ERMVNEAEKYRNEDDKQKETIQAKNALESY 372
V ++K +K++K N + E+ E ++EK ++ K + KNA ++
Sbjct: 70 VVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDAL 129
Query: 371 CFSMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 213
M DE+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 130 ADDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.28
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -2
Query: 488 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 312
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 311 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 213
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.28
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -2
Query: 476 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 297
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 296 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 207
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 29.5 bits (63), Expect = 0.49
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -2
Query: 566 DANGIXNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 393
D NVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 392 KNA 384
+A
Sbjct: 118 LDA 120
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 29.5 bits (63), Expect = 0.49
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Frame = -2
Query: 536 IEKSTNKENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNAL------E 378
IE EN++ I N L K +++ R ++ +N+++ +++ A + L
Sbjct: 793 IEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAA 852
Query: 377 SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 237
++ + +DEKLK+ D ++ N+ + D ++D E
Sbjct: 853 NHALLFRKFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
Score = 25.8 bits (54), Expect = 6.1
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Frame = -2
Query: 572 DIDANGIXNVSAIEKSTNKENKIT----ITNDKGRLSKEEIER-----MVNEAE-KYRNE 423
D+D VS IEK+T + +T N G+L K EIE ++N+ E
Sbjct: 1209 DLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIEESKKPDVLNQVSLSIEEE 1268
Query: 422 DDKQKETIQAKNA 384
K KE+ NA
Sbjct: 1269 KPKNKESEVDNNA 1281
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.65
Identities = 22/95 (23%), Positives = 42/95 (44%)
Frame = -2
Query: 500 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 321
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 320 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 216
D++++ D +K+ L + EY +QK
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQK 524
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.65
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 488 KGRLSKEEIERMVNEAEKYRNEDD 417
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.86
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 332 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 207
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 1.1
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = -2
Query: 479 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE-SYCFSMKSTMEDEKLKEKISDSDKQ 303
L+ + ++ + E E K+ ET++ KN+ + + ++ E LK +K
Sbjct: 485 LASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKD 544
Query: 302 TILDKCNDTIKWLDSN--QLADK-EEYEHKQKELEGIYNPII 186
++++ IK + N +L +EY +K K+ E YN ++
Sbjct: 545 RLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVM 586
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -2
Query: 470 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 294
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 293 DKCNDTIKWLDSNQLADKEEYEHKQK 216
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +1
Query: 541 ETLXIPLASMSKVTSI*GTPRGAGGIP 621
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.0
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -2
Query: 482 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 306
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 305 QTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIY 198
+T + + K L +N+L+ E + E E Y
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKENDY 1044
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -2
Query: 494 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 318
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 317 DSDKQT 300
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 545 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 420
VS ++S K + + K EE+E VNE E++R D
Sbjct: 259 VSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 27.5 bits (58), Expect = 2.0
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Frame = -2
Query: 620 GIPPAPRGVPQIEVTXDIDANGIXNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 441
G+ G+P+ + D G + S + + + +TIT GR K +
Sbjct: 110 GLSVTTTGLPKFKNIVDCTGAGDVDTSVEVAAADSNDYLTITGRSGRTLK--------LS 161
Query: 440 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK-EKISDSDKQTILDKCNDTIKWL 264
++++N K K + K A E + ++ + +KL+ E ++ S+++ + D ++ K+
Sbjct: 162 KEWKNPSKKWK--VGCKLAYEFFPKDLRKRL--QKLETEDMNKSNRKLLQDATDEYAKFK 217
Query: 263 DSNQLA--DKEEYEHKQKELE 207
D A DK+ + QKELE
Sbjct: 218 DKFPEAPLDKDNLQ-TQKELE 237
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 27.1 bits (57), Expect = 2.6
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -2
Query: 560 NGIXNVSAIEK-STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 384
NG + S K ST+ + + DK + E+I + ++Y NED+ + +++ A
Sbjct: 375 NGTESQSKTTKHSTSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPA 434
Query: 383 LESYCFSMKSTMEDEKLKEKISDSD 309
S+ ++ +T++ + KI +S+
Sbjct: 435 AVSFS-TITNTIQAKYSNRKIKNSN 458
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -2
Query: 506 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 327
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 326 KISDSDKQTILDKCNDTIK 270
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 27.1 bits (57), Expect = 2.6
Identities = 27/115 (23%), Positives = 53/115 (46%)
Frame = -2
Query: 683 YVEGELAMTKDNNLLGKFELTGIPPAPRGVPQIEVTXDIDANGIXNVSAIEKSTNKENKI 504
+V+ E+ +KD + + K E V Q E+ + S +EK +K+ K+
Sbjct: 78 HVDSEIETSKDESSVNKVEEKVEEFKEDNVEQ-EIKQKRSLSESPQESMLEK-VSKKPKV 135
Query: 503 TITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 339
+ +++ +S E +E + NE + D+Q + KNA + S+ S + D+
Sbjct: 136 SEAHNE-EISPENVETIENELDLPVKGKDEQTTGLVYKNANDLLTGSLLSFIVDD 189
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 455 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 351
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 3.5
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -2
Query: 452 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 273
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 272 KWLDSNQLADKEEYEHKQKELEGIYNPI 189
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -2
Query: 545 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 384
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 425 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 264
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 515 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 345
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 4.6
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -2
Query: 473 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 321
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 320 SDSDKQTILDKCND 279
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 4.6
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -2
Query: 533 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 354
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 353 TMEDEKLKEKISDSDK 306
DE L ++ DS +
Sbjct: 88 QDADETLHQEAQDSSE 103
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 470 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 300
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 4.6
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 506 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 330
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 329 EKISDSDKQTILDKC 285
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -2
Query: 476 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 354
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 135 PGRSTRRPEVPPPGLEALA 79
PGR R+ E PPP EA A
Sbjct: 305 PGRIDRKIEFPPPSAEARA 323
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 488 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 378
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 6.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -2
Query: 422 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 246
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 245 DK 240
DK
Sbjct: 238 DK 239
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 560 NGIXNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 420
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -2
Query: 473 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 294
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 293 D 291
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 527 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 366
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -2
Query: 473 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 294
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 293 DKC 285
D C
Sbjct: 754 DGC 756
>SPCC757.08 |||exosome subunit Rrp45 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 291
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 120 RRPEVPPPGLEALAPPYEEXD*TNIPHLHLNLPVTTTFT 4
RRPE+ G E P EE +P L++P+ TF+
Sbjct: 162 RRPELTVVGEEVTVHPVEER--VPVPLSILHMPICVTFS 198
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 512 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 336
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 335 LKEKISDSDK 306
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 25.4 bits (53), Expect = 8.0
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = -2
Query: 548 NVS--AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 375
NVS +EK T + +I + + + + M+++ +K R+ DDK E IQA +S
Sbjct: 289 NVSEHTVEKVTIFDIRINTEDPRHSQIRSFLATMMSQ-DKIRSIDDKLTELIQAITYSQS 347
Query: 374 YCFSMKSTMED--EKLKEKISDS--DKQTILDKCN 282
MK E E + E I D + +LD N
Sbjct: 348 KYDFMKKFSESPIEFINEWIESQSRDLEIVLDGTN 382
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 392 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 267
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 530 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 402
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -2
Query: 428 NEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 252
NE + Q + ++ K N + + E+ +K + + D L+ + + L N
Sbjct: 590 NELNSQIDELKLKLNEANKKYQELAISFENSNVKTQSVEPDNGLSLEALKNENQTLLKNL 649
Query: 251 LADKEEYEHKQKELEGIYNPI 189
YEH QK + ++N +
Sbjct: 650 EDSTARYEHLQKSFKNVFNQL 670
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,521,640
Number of Sequences: 5004
Number of extensions: 46055
Number of successful extensions: 256
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -