Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_B11
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 60 2e-09
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 60 2e-09
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 60 2e-09
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 39 0.003
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 39 0.003
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 39 0.003
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 39 0.004
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 36 0.028
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 31 0.60
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 31 0.60
AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical ... 29 2.4
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = -2
Query: 693 ENSDEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDT 520
E D I GAVVNVR K DK+++WT DA + + IG+ LK++L I + ++VH+D+
Sbjct: 142 EYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDS 201
Query: 519 MVKHSSATK 493
+ SS K
Sbjct: 202 SARTSSTVK 210
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = -2
Query: 693 ENSDEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDT 520
E D I GAVVNVR K DK+++WT DA + + IG+ LK++L I + ++VH+D+
Sbjct: 141 EYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDS 200
Query: 519 MVKHSSATK 493
+ SS K
Sbjct: 201 SARTSSTVK 209
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = -2
Query: 693 ENSDEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDT 520
E D I GAVVNVR K DK+++WT DA + + IG+ LK++L I + ++VH+D+
Sbjct: 139 EYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDS 198
Query: 519 MVKHSSATK 493
+ SS K
Sbjct: 199 SARTSSTVK 207
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Frame = -2
Query: 693 ENSDEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----I 544
++ + I G V NVR + KI++WT + + IG LKE+L H K I
Sbjct: 116 KDMESICGLVCNVRGQGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVI 175
Query: 543 GFQVHRDTMVKHSSATKNLYTV 478
+Q HR+ + K +SA K +++
Sbjct: 176 HYQTHRNCVKKTTSALKYKFSL 197
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Frame = -2
Query: 693 ENSDEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----I 544
++ + I G V NVR + KI++WT + + IG LKE+L H K I
Sbjct: 155 KDMESICGLVCNVRGQGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVI 214
Query: 543 GFQVHRDTMVKHSSATKNLYTV 478
+Q HR+ + K +SA K +++
Sbjct: 215 HYQTHRNCVKKTTSALKYKFSL 236
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Frame = -2
Query: 693 ENSDEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----I 544
++ + I G V NVR + KI++WT + + IG LKE+L H K I
Sbjct: 116 KDMESICGLVCNVRGQGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVI 175
Query: 543 GFQVHRDTMVKHSSATKNLYTV 478
+Q HR+ + K +SA K +++
Sbjct: 176 HYQTHRNCVKKTTSALKYKFSL 197
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -2
Query: 693 ENSDEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQL 562
++ + I G V NVR K KI++WT D + IG LKE+L
Sbjct: 119 KDMESICGLVCNVRGKGSKISVWTKDCNDDETNMRIGVVLKEKL 162
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 693 ENSDEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKEQL 562
++ + + G V NVR K KI++WT ++ A + IG LK+ L
Sbjct: 124 DDIESLCGIVCNVRGKGSKISVWTTNSADDGANLRIGGVLKQVL 167
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = -2
Query: 684 DEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--QLGIHGKIGFQVHRDTMVK 511
DE+ GAV ++R + D I++W +A T I + L+ QL + + ++ H D +
Sbjct: 140 DELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRHDDCLRD 199
Query: 510 HSS---ATKNL 487
SS TKN+
Sbjct: 200 QSSYRHTTKNI 210
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = -2
Query: 684 DEIXGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--QLGIHGKIGFQVHRDTMVK 511
DE+ GAV ++R + D I++W +A T I + L+ QL + + ++ H D +
Sbjct: 140 DELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRHDDCLRD 199
Query: 510 HSS---ATKNL 487
SS TKN+
Sbjct: 200 QSSYRHTTKNI 210
>AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical
protein Y105E8A.5 protein.
Length = 576
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 456 KICNAKTKQCIDSWSQNYA*PLCLCVLGNQSCRVSLAVLSVFS 584
KI N+ T CI +++ A PL + V+G + C + L F+
Sbjct: 180 KIANSATITCIAKLTKSTAEPLDILVIGTEHCEIFLIDSQAFT 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,490,795
Number of Sequences: 27780
Number of extensions: 255337
Number of successful extensions: 536
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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