Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_B10
(621 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 31 0.10
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 31 0.13
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 0.95
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 28 1.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.9
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 27 2.9
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 26 5.1
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 25 8.8
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 25 8.8
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 25 8.8
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 31.5 bits (68), Expect = 0.10
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 463 SSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMM 350
S DYHL++ L E YK QR GK LK+++
Sbjct: 31 SHLTDYHLMEKLGEGTFGEVYKSQRRKDGKVYALKRIL 68
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 31.1 bits (67), Expect = 0.13
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = -3
Query: 598 SVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGE 419
S L ++ S S S L+ + +E + + V++ CE F + YL
Sbjct: 148 STEELSSFDTTLLNSDTSKLSGLDDSSFMEEEFVWQVDNVLQECEKKFTPHSKGSYLKEN 207
Query: 418 FLDEQYKGQRD-LAGKASTLKKMMDK 344
E KG+ D L + + LK+ +DK
Sbjct: 208 LKSELRKGRLDELMCENTALKEKIDK 233
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 0.95
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 529 EHALKLESDVTNSIREVIKTCESSFNDYHLV--DYLSGEFLDEQYKGQRDL 383
E +L V N I ++KTC +S ND ++ DY+S + + K Q+DL
Sbjct: 749 ESQKELMYGVRNDIDALVKTCTTSLNDADIILSDYISDQKSKFESK-QQDL 798
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 538 SALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQY 401
S L+ K +S+ N IR +I E++ H +S FL+E Y
Sbjct: 669 SQLKKVYKPKSEAINPIRTIISNWENNSYTNHSSYQISNLFLEEDY 714
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 2.9
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 467 REQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDD-GQARRPRRVHLRQETPR 300
R +Q + PG L P+RT P P+R G+ PQ Q P+R ++ P+
Sbjct: 516 RTGMQPMMPG-LQQPMAPQRTGMQPMMPQRTGMQPQMTGFQQPMAPQRTGMQPMMPQ 571
Score = 26.6 bits (56), Expect = 2.9
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = -2
Query: 494 QHPGGHQDLREQ---LQRLPPGRLLVRG--IPRRTVQGPARPRRQGLDPQEDD-GQARRP 333
Q PG Q + Q +Q + P R ++ P+RT P P+R G+ PQ Q P
Sbjct: 578 QMPGMQQPMAPQRTGMQPMMPQRTGMQQPMAPQRTGMQPMMPQRTGMQPQMPGMQQPMAP 637
Query: 332 RRVHLRQETPR 300
+R ++ P+
Sbjct: 638 QRTGMQPMMPQ 648
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 416 PRRTVQGPARPRRQGLDPQEDD-GQARRPRRVHLRQETPR 300
P+RT P P+R G+ PQ Q P+R ++ P+
Sbjct: 637 PQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMAPQ 676
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 416 PRRTVQGPARPRRQGLDPQEDD-GQARRPRRVHLRQETPR 300
P+RT P P+R G+ PQ Q P+R ++ P+
Sbjct: 703 PQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMAPQ 742
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 416 PRRTVQGPARPRRQGLDPQEDD-GQARRPRRVHLRQETPR 300
P+RT P P+R G+ PQ Q P+R ++ P+
Sbjct: 560 PQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMMPQ 599
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 416 PRRTVQGPARPRRQGLDPQEDDG 348
P+RT P P+R G+ PQ G
Sbjct: 731 PQRTGMQPMAPQRTGMQPQMTGG 753
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 517 KLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQ 404
++E DV S++ + DYH LSGE LD +
Sbjct: 146 EVEKDVQGSLKSKDGFRSVTLKDYHRQKLLSGEILDAE 183
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 25.8 bits (54), Expect = 5.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 211 ILRHIFLLITFQNGFERNGGVTCKIFICSIRG 306
+LR + + NG E++ C+ F C+IRG
Sbjct: 191 MLRQLIKFRSHLNGDEKSALDGCRFFTCAIRG 222
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 302 RIEHINILHVTPPLRSNPF*NVISKKI 222
++ +NI HV+ P+ S+ F + +SK I
Sbjct: 1213 KVGRLNINHVSEPIDSDEFADYLSKSI 1239
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 8.8
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -3
Query: 595 VTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYH 443
V+N TY P + +E A LES E + ESS N+ H
Sbjct: 85 VSNAQTYNMPGSLVYECSVLIANTANSLESKDGTLNEEENEEMESSINEEH 135
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -2
Query: 500 HQQHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQGP 393
H QH H+ +E L+ PG + P + Q P
Sbjct: 196 HHQHIQAHEMAQESLETRNPGNISSSSAPLASDQSP 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,170,937
Number of Sequences: 5004
Number of extensions: 43215
Number of successful extensions: 118
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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