Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_B09
         (609 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5WGW5 Cluster: Putative uncharacterized protein; n=8; ...    34   3.0  
UniRef50_UPI0000F208A9 Cluster: PREDICTED: similar to G protein-...    33   5.3  

>UniRef50_A5WGW5 Cluster: Putative uncharacterized protein; n=8;
           Proteobacteria|Rep: Putative uncharacterized protein -
           Psychrobacter sp. PRwf-1
          Length = 326

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = +3

Query: 378 SCAIYLFSITLFFPSSFCPPSLTLRGVKRMLTIRIRKLVGVNILPISKASFSSPLKGYKN 557
           SC +  F I  F P+SF PP  T+ G+  +L +    LVG+  L  S  +    L   + 
Sbjct: 137 SCVLIGFVIGQFLPASFMPPGNTMTGLLMLLIL----LVGIG-LKASGITLKEVLLSKRG 191

Query: 558 KKKTPVFTL 584
            + + +FTL
Sbjct: 192 MQTSVIFTL 200


>UniRef50_UPI0000F208A9 Cluster: PREDICTED: similar to G
           protein-coupled receptor family C group 6 member A; n=2;
           Danio rerio|Rep: PREDICTED: similar to G protein-coupled
           receptor family C group 6 member A - Danio rerio
          Length = 836

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 420 SSFCPPSLTLRGVK-RMLTIRIRKLVGVNILPISKASFSSPLKGYKNKKKTPVF 578
           S FCPPS  + G +   L+I I KL+ + ++P    S SSP+    +K + P F
Sbjct: 131 SDFCPPSKAIMGERYSELSIAIAKLLSLYLVPQVSTSSSSPV--LSDKLRYPSF 182


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,458,073
Number of Sequences: 1657284
Number of extensions: 8511082
Number of successful extensions: 16172
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16171
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)