Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_B06
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   3.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.7  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 425 FIVEGIIPKFISKVFHLGNNNRTINAC 505
           F V+ I+  F+S  FH G +  T+N C
Sbjct: 74  FTVQNILT-FLSCRFHQGASYNTLNTC 99


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 47  SSLNHSHKPACLLCSNIHXTKSFHS 121
           S+LNH+ +    LC N   TK+ +S
Sbjct: 323 SNLNHNEQLRKYLCKNEDETKNHYS 347


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 47  SSLNHSHKPACLLCSNIHXTKSFHS 121
           S+LNH+ +    LC N   TK+ +S
Sbjct: 215 SNLNHNEQLRKYLCKNEDETKNHYS 239


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 439 HHTQIHLQGLPPWQQQQNHQCLHFL 513
           HH   H+Q   P   Q +HQ  H +
Sbjct: 165 HHMGHHMQEQHPQHHQPHHQQQHMM 189


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 439 HHTQIHLQGLPPWQQQQNHQCLHFL 513
           HH   H+Q   P   Q +HQ  H +
Sbjct: 167 HHMGHHMQEQHPQHHQPHHQQQHMM 191


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 538 ELSLQSLHQWPDH 576
           E+ LQ LHQ+P H
Sbjct: 124 EVKLQHLHQFPHH 136


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 354 LASVRAVRTTFVGSMMPF 407
           +AS R  R TF+ S +PF
Sbjct: 180 MASTRYARQTFIFSAIPF 197


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 389 GVNDALFNHVYIFIVEGIIPKFISKVF 469
           G+   +FN VY++  +     F+ +VF
Sbjct: 149 GLTSPIFNLVYVYCCDNNFNVFLRQVF 175


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 440 IIPKFISKVFHLGNNNRTINACIFCYCHA 526
           I+   +  +F++   N T+N  +F +C A
Sbjct: 67  IVGCILKHIFNILMKNVTLNDVVFIFCSA 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,662
Number of Sequences: 336
Number of extensions: 3456
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)