Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_pT_B05
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001156-1|AAH01156.1|  289|Homo sapiens thioredoxin-like 1 prot...    61   3e-09
AF143897-1|AAF66676.1|  289|Homo sapiens thioredoxin-like protei...    61   3e-09
AF052659-1|AAC39898.1|  289|Homo sapiens thioredoxin-related pro...    61   3e-09
AF051896-1|AAC05830.1|  289|Homo sapiens thioredoxin homolog pro...    61   3e-09
AF003938-1|AAC39599.1|  289|Homo sapiens thioredoxin-like protei...    61   3e-09
AB209263-1|BAD92500.1|  280|Homo sapiens thioredoxin-like 1 vari...    46   1e-04

>BC001156-1|AAH01156.1|  289|Homo sapiens thioredoxin-like 1
           protein.
          Length = 289

 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = -2

Query: 594 IQLFIKDNQSGDEVTQINHLAFYGSPISTTNMGEFKRVAGKKGESH 457
           + +F++ NQ  +E T+I++  F G+P+  TNM +FKRV GKKGESH
Sbjct: 244 VTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRVVGKKGESH 289


>AF143897-1|AAF66676.1|  289|Homo sapiens thioredoxin-like protein
           protein.
          Length = 289

 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = -2

Query: 594 IQLFIKDNQSGDEVTQINHLAFYGSPISTTNMGEFKRVAGKKGESH 457
           + +F++ NQ  +E T+I++  F G+P+  TNM +FKRV GKKGESH
Sbjct: 244 VTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRVVGKKGESH 289


>AF052659-1|AAC39898.1|  289|Homo sapiens thioredoxin-related
           protein protein.
          Length = 289

 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = -2

Query: 594 IQLFIKDNQSGDEVTQINHLAFYGSPISTTNMGEFKRVAGKKGESH 457
           + +F++ NQ  +E T+I++  F G+P+  TNM +FKRV GKKGESH
Sbjct: 244 VTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRVVGKKGESH 289


>AF051896-1|AAC05830.1|  289|Homo sapiens thioredoxin homolog
           protein.
          Length = 289

 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = -2

Query: 594 IQLFIKDNQSGDEVTQINHLAFYGSPISTTNMGEFKRVAGKKGESH 457
           + +F++ NQ  +E T+I++  F G+P+  TNM +FKRV GKKGESH
Sbjct: 244 VTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRVVGKKGESH 289


>AF003938-1|AAC39599.1|  289|Homo sapiens thioredoxin-like protein
           protein.
          Length = 289

 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = -2

Query: 594 IQLFIKDNQSGDEVTQINHLAFYGSPISTTNMGEFKRVAGKKGESH 457
           + +F++ NQ  +E T+I++  F G+P+  TNM +FKRV GKKGESH
Sbjct: 244 VTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRVVGKKGESH 289


>AB209263-1|BAD92500.1|  280|Homo sapiens thioredoxin-like 1 variant
           protein.
          Length = 280

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 16/39 (41%), Positives = 28/39 (71%)
 Frame = -2

Query: 594 IQLFIKDNQSGDEVTQINHLAFYGSPISTTNMGEFKRVA 478
           + +F++ NQ  +E T+I++  F G+P+  TNM +FKRV+
Sbjct: 239 VTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRVS 277


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,166,265
Number of Sequences: 237096
Number of extensions: 1754880
Number of successful extensions: 5816
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5816
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)