Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_A23
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase... 61 2e-10
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 48 1e-06
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 43 6e-05
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 30 0.33
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.7
SPAC227.01c ||SPAPB21F2.04c|Erd1 homolog|Schizosaccharomyces pom... 27 2.3
SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta 5-->4-i... 26 5.3
SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr 1|||M... 26 5.3
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 26 7.0
>SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase
Fkh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 112
Score = 61.3 bits (142), Expect = 2e-10
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = -2
Query: 314 RKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
+ GD + MHYTGTL +G +FDSS+ RG+P +G GQ+I+GWD
Sbjct: 18 KPGDRITMHYTGTLTNGKKFDSSVDRGSPFVCTIGVGQLIRGWD 61
Score = 46.4 bits (105), Expect = 5e-06
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -3
Query: 202 KLLRVGXQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIERK 35
+L+R +G+ M GE+ KL I P+ YG G P IP ++TL F VEL+ I K
Sbjct: 55 QLIRGWDEGVPKMSLGEKAKLTITPDYGYGPRGFPGLIPPNSTLLFDVELLAINDK 110
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = -3
Query: 202 KLLRVGXQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 44
+++R G+ GM EG +RK+ IP +AYG+ P IPK++TL F V+LV++
Sbjct: 309 EVIRGWDVGVAGMQEGGERKITIPAPMAYGNQSI-PGIPKNSTLVFEVKLVRV 360
Score = 44.0 bits (99), Expect = 2e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = -2
Query: 308 GDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
G + M Y G L++G FD + +G P F LG G+VI+GWD
Sbjct: 275 GKKVEMRYIGKLENGKVFDKNT-KGKPFAFILGRGEVIRGWD 315
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2
Query: 293 MHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
M Y G L +G FD +I G P TF LG +VIKGWD
Sbjct: 281 MRYIGRLTNGKVFDKNIT-GKPFTFNLGLEEVIKGWD 316
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = -3
Query: 217 NLVLVKLLRVGXQGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 44
NL L ++++ G++GM G +R + IP +AYGS P IP ++ L F V+L+ +
Sbjct: 305 NLGLEEVIKGWDVGIVGMQVGGERTIHIPAAMAYGSKRL-PGIPANSDLVFDVKLLAV 361
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 30.3 bits (65), Expect = 0.33
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +2
Query: 509 SLFNCYKTLL-NTKMRFKSTLECSVKINL*IEN---YVCRFTHLNNILN 643
SL N Y TLL NT++RF+ L S +N EN +V HL +++N
Sbjct: 628 SLTNWYSTLLKNTQIRFRKILRFSETLNSRFENASDFVISEGHLPDLVN 676
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 127 ELAYGSAGAPPKIPKSATLTFHVELVKIERKD 32
EL Y AG PP +PK A H++ E D
Sbjct: 86 ELDYNKAGDPPILPKQAKDDHHIKRSSSETAD 117
>SPAC227.01c ||SPAPB21F2.04c|Erd1 homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 47 FHQFYVKSKSSRLWYLWWCSS*TIS--QFWWN 136
F + K + S LW+LW SS S FWW+
Sbjct: 233 FLGIFAKKRFSFLWFLWNTSSAINSTYSFWWD 264
>SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta
5-->4-isomerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 251 SSIPRGNPLTFKLGSGQVIKGWD-XRATW 168
SS P N F + +GQVI WD RA W
Sbjct: 226 SSNPTANGQVFFITNGQVIYFWDFARAIW 254
>SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 83 LWYLWWCSS*TISQFWWNDKFTLFSF 160
++YLW CS SQF + FT+ F
Sbjct: 30 MYYLWACSKFNDSQFIKPESFTIAGF 55
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 35 LSFNFHQFYVKSKSSRLWYLWWCSS 109
LSF +++V+SK + +WCS+
Sbjct: 388 LSFWSREYFVRSKGKSYLHCFWCSA 412
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,740,623
Number of Sequences: 5004
Number of extensions: 48589
Number of successful extensions: 128
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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