BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_pT_A23
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 97 9e-21
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 63 2e-10
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 61 1e-09
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 56 4e-08
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 56 4e-08
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 55 5e-08
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 55 5e-08
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 54 9e-08
AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 31 0.93
AL032663-6|CAA21766.2| 349|Caenorhabditis elegans Hypothetical ... 30 2.1
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 97.5 bits (232), Expect = 9e-21
Identities = 45/61 (73%), Positives = 47/61 (77%)
Frame = -2
Query: 365 KLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 186
KLQIG+KKR E+C KSRKGD LHMHYTGTL DGTEFDSS R TF LG G VIKGW
Sbjct: 26 KLQIGVKKRAENCVQKSRKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGW 85
Query: 185 D 183
D
Sbjct: 86 D 86
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = -3
Query: 181 QGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIERKDE 29
QGLL MC GE+R L IPP L YG GAPPKIP ++ L F VEL+KI+R E
Sbjct: 87 QGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELMKIDRDGE 137
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = -3
Query: 169 GMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIERKDEL 26
GMCEGE+R++VIP E YGS G+PP+IP A L F + L K+ ++DEL
Sbjct: 212 GMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKLVKRDEL 259
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = -2
Query: 332 DCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
+C IKS GD++ +Y T + G E S+ + P TF LG QVI G D
Sbjct: 44 ECEIKSAGGDVVDQYYKLTDEKGVEIGSNFGK-KPYTFTLGRNQVIPGMD 92
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -2
Query: 350 IKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
I K D K+ GD ++ Y L+D T DSS R P F+L + +VI G D
Sbjct: 152 IHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMD 207
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -3
Query: 181 QGLLGMCEGEQRKLVIPPELAYG--SAGAP 98
+ + GMC GE RK+VIPP+L + S G P
Sbjct: 93 RAMRGMCIGEIRKVVIPPKLGFAKDSTGQP 122
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/60 (50%), Positives = 37/60 (61%)
Frame = -2
Query: 362 LQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
+ I I E C+ K++ GD LH YT L+DG+ DSS R P FK+GSGQVIKG D
Sbjct: 148 VHIHITHEVEGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMD 207
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Frame = -3
Query: 169 GMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIER--KDEL 26
GMC+GE+RK+VIPPELAYG G PP IP ++ L F + L K+ R K+EL
Sbjct: 212 GMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSLEKLVRPGKEEL 261
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = -3
Query: 169 GMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIER 38
GMC GEQRK++IPPE + G + K TL + VEL I R
Sbjct: 93 GMCVGEQRKVIIPPEQGFDEDGDEVE-GKGETLYYFVELKSIFR 135
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = -2
Query: 365 KLQIGIKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGW 186
K++I K C IKS GD L Y + +G S+ + P TF LG G+VI G
Sbjct: 29 KIEIIKKIGDSKCKIKSESGDQLEQFYKLSDKEGKVIGSNFGQ-KPYTFTLGKGEVIHGM 87
Query: 185 D 183
+
Sbjct: 88 E 88
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -2
Query: 350 IKKRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
IKK + +K G + +HY GTL++GT+FDSS RG+ +F LG G VIKGWD
Sbjct: 20 IKKEGQGV-VKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWD 74
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = -3
Query: 178 GLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIERKD 32
G+ M +GE + I + YG AG+PPKIP ATL F VEL + +D
Sbjct: 76 GVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAED 124
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -2
Query: 320 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
K + G + HY TL++G + DSS RG P FK+G G+VIKGWD
Sbjct: 16 KPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWD 61
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -3
Query: 181 QGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 44
QG+ M GE+ KL I +L YG G PP+IP +ATL F VEL+ +
Sbjct: 62 QGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -2
Query: 320 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
K + G + HY TL++G + DSS RG P FK+G G+VIKGWD
Sbjct: 16 KPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWD 61
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -3
Query: 181 QGLLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKI 44
QG+ M GE+ KL I +L YG G PP+IP +ATL F VEL+ +
Sbjct: 62 QGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -3
Query: 175 LLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIERKDEL 26
+ GMCEGE+R++VIP + YG G P IP A L F + L K+ ++DEL
Sbjct: 215 MTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKLIQRDEL 264
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = -2
Query: 344 KRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDXRAT 171
K ED KS+ GD +H Y L+DGT DSS R P FKL + +VIKG D T
Sbjct: 159 KIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMT 216
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -2
Query: 341 RPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDXRAT 171
+ E C IKS+ GD+L Y + DG E S+ + P TF LG GQVI G + T
Sbjct: 39 KAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMT 94
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -3
Query: 181 QGLLGMCEGEQRKLVIPPELAYGSAGAP-PKIPKSATLTFHVELVKIER 38
+ + GMC+GE+RK+VIP L +G G I + TL + V+LV + R
Sbjct: 91 RAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDLFR 139
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -3
Query: 175 LLGMCEGEQRKLVIPPELAYGSAGAPPKIPKSATLTFHVELVKIERKDEL 26
+ GMCEGE+R++VIP + YG G P IP A L F + L K+ ++DEL
Sbjct: 251 MTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKLIQRDEL 300
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = -2
Query: 344 KRPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDXRAT 171
K ED KS+ GD +H Y L+DGT DSS R P FKL + +VIKG D T
Sbjct: 195 KIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMT 252
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -2
Query: 341 RPEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWDXRAT 171
+ E C IKS+ GD+L Y + DG E S+ + P TF LG GQVI G + T
Sbjct: 75 KAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMT 130
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -3
Query: 181 QGLLGMCEGEQRKLVIPPELAYGSAGAP-PKIPKSATLTFHVELVKIER 38
+ + GMC+GE+RK+VIP L +G G I + TL + V+LV + R
Sbjct: 127 RAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLVDLFR 175
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 54.4 bits (125), Expect = 9e-08
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = -2
Query: 320 KSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKGWD 183
KS+ G + HY L DGT+ DSS R P FK+G G+VIKGWD
Sbjct: 212 KSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGWD 257
>AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding
protein family protein7 protein.
Length = 318
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -2
Query: 362 LQIGIKKR--PEDCSIKSRKGDLLHMHYTGTLDDGTEFDSSIPRGNPLTFKLGSGQVIKG 189
L I I+K P C ++++ D + HY +D + + G P+T +LG+G ++ G
Sbjct: 73 LDIKIEKTFVPAKCPQQAKRLDFVTFHYKVFTEDNKKVYQTYGTG-PVTIQLGTGMIMPG 131
Query: 188 WD 183
D
Sbjct: 132 LD 133
>AL032663-6|CAA21766.2| 349|Caenorhabditis elegans Hypothetical
protein Y75B12B.7 protein.
Length = 349
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 364 NYKLALRKDLRTVPSRAAKEIFCICTTLAL*MTVQNLIVQFLE 236
++ + +RK LR+ P + + CIC L L QN I LE
Sbjct: 36 HFSILIRKSLRSSPVFSMMFVICICDLLQLLTQTQNDIKYILE 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,122,048
Number of Sequences: 27780
Number of extensions: 274085
Number of successful extensions: 559
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -